CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE01684
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE01684
T084963_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-27
M00629_2.00
Caenorhabditis elegans
NNDKGGYG
CRCCMHNN
PBM
Narasimhan et al.(2015)
pTH9165
0.808
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE01684
C2H2 ZF
260
283
YCCPKCGASFTRRYLASTHIKDVH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN03534
Caenorhabditis brenneri
CBN03534
I
0.808
CBN17670
Caenorhabditis brenneri
CBN17670
I
0.808
CBG02740
Caenorhabditis briggsae
CBG02740
I
0.808
ztf-27
Caenorhabditis elegans
WBGene00011661
D
0.808
CJA04037
Caenorhabditis japonica
CJA04037
I
0.808