CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EFV55968
(
Trichinella spiralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
EFV55968
T085742_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFV55968
C2H2 ZF
40
62
YICHICGFSNESKFHFNSHMNTH
EFV55968
C2H2 ZF
65
88
HKCDICDYTSRTEGRLKRHMKQFH
EFV55968
C2H2 ZF
142
164
YRCKQCLFVASSKNDFWIHQRTH
EFV55968
C2H2 ZF
171
193
LACPKCPFITEYKHHLEYHLRNH
EFV55968
C2H2 ZF
199
221
FKCTKCNYSCVNKSMLNSHMKSH
EFV55968
C2H2 ZF
227
251
YRCADCTYATKYCHSLKLHLRKYGH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella spiralis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G57800
Brachypodium distachyon
BRADI3G57800
N
LPERR02G27810
Leersia perrieri
LPERR02G27810
N
ORGLA11G0181000
Oryza glaberrima
ORGLA11G0181000
N
OGLUM02G34390
Oryza glumaepatula
OGLUM02G34390
N
BGIOSGA005538
Oryza indica
BGIOSGA005538
N
OLONG_009224
Oryza longistaminata
OLONG_009224
N
OPUNC02G31340
Oryza punctata
OPUNC02G31340
N