ENSAMXG00000016347 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000016347 T087326_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.799 0.875
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.799 0.875
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.799 0.875
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000016831 C2H2 ZF 1 19
ENSAMXP00000016831 C2H2 ZF 25 47
ENSAMXP00000016831 C2H2 ZF 53 75
ENSAMXP00000016831 C2H2 ZF 81 104

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac097 Arabidopsis lyrata fgenesh2_kg.8__960__AT5G50820.1 N
anac097 Arabidopsis thaliana AT5G50820 N
Bostr.15774s0222 Boechera stricta Bostr.15774s0222 N
Bra035712 Brassica rapa Bra035712 N
Cagra.7393s0016 Capsella grandiflora Cagra.7393s0016 N
Carubv10027180m.g Capsella rubella Carubv10027180m.g N
Thhalv10014770m.g Eutrema salsugineum Thhalv10014770m.g N