CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF483
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000012390
T087859_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF483
M07638_2.00
Homo sapiens
TGCAGCTCYCTSHNN
NNDSAGRGAGCTGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF483.RCADE.ReprocessedData
0.782
0.948
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000055874
C2H2 ZF
391
408
QKCSNCGVAFTRSSSLSK
ENSBTAP00000055874
C2H2 ZF
441
462
KCSKCGKAFGYSASLTKHRRIH
ENSBTAP00000055874
C2H2 ZF
468
490
YLCNDCGKAFSDSSSLTPHHRTH
ENSBTAP00000055874
C2H2 ZF
496
518
FKCDDCGKSFTLSAHLIKHQRVH
ENSBTAP00000055874
C2H2 ZF
524
546
YKCKDCGRPFSDSSSLIQHQRIH
ENSBTAP00000055874
C2H2 ZF
552
574
YTCNNCGKSFSHSSSLSKHQRIH
ENSBTAP00000055874
C2H2 ZF
580
602
YKCGECGKAFRQNSCLTRHQRIH
ENSBTAP00000055874
C2H2 ZF
608
630
YLCNDCGMTFSHFTSVIYHQRLH
ENSBTAP00000055874
C2H2 ZF
636
658
YKCTQCEKAFPTHSLLSRHQRIH
ENSBTAP00000055874
C2H2 ZF
664
686
YKCKDCGKSFSQSSSLNEHHRIH
ENSBTAP00000055874
C2H2 ZF
692
714
YECNYCGATFSRSSILVEHLKIH
ENSBTAP00000055874
C2H2 ZF
720
742
YECNECEKTFKSNSGLIRHRGFH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin101255
Clonorchis sinensis
csin101255
N
ECPE_0000074901
Echinostoma caproni
ECPE_0000074901
N
T265_06123
Opisthorchis viverrini
T265_06123
N
SCUD_0001033801
Schistosoma curassoni
SCUD_0001033801
N
B_00204
Schistosoma haematobium
B_00204
N
B_00214
Schistosoma haematobium
B_00214
N
Sjc_0050180
Schistosoma japonicum
Sjc_0050180
N
SMRZ_0002378801
Schistosoma margrebowiei
SMRZ_0002378801
N
SMTD_0000267601
Schistosoma mattheei
SMTD_0000267601
N