ZNF550 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000002421 T088229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.817 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000003515 C2H2 ZF 202 224
ENSCAFP00000003515 C2H2 ZF 230 252
ENSCAFP00000003515 C2H2 ZF 258 280
ENSCAFP00000003515 C2H2 ZF 286 308
ENSCAFP00000003515 C2H2 ZF 314 336
ENSCAFP00000003515 C2H2 ZF 342 364
ENSCAFP00000003515 C2H2 ZF 370 392
ENSCAFP00000003515 C2H2 ZF 398 420

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000006374 Anas platyrhynchos ENSAPLG00000006374 N
ENSACAG00000002042 Anolis carolinensis ENSACAG00000002042 N
AALB004801 Anopheles albimanus AALB004801 N
AARA005693 Anopheles arabiensis AARA005693 N
ACUA018681 Anopheles culicifacies ACUA018681 N
ADIR007401 Anopheles dirus ADIR007401 N
AEPI004567 Anopheles epiroticus AEPI004567 N
AFAF016470 Anopheles farauti AFAF016470 N
AFAF010529 Anopheles farauti AFAF010529 N
AFUN006142 Anopheles funestus AFUN006142 N
AFUN006141 Anopheles funestus AFUN006141 N
AMEC014801 Anopheles melas AMEC014801 N
AMIN011034 Anopheles minimus AMIN011034 N
AQUA011153 Anopheles quadriannulatus AQUA011153 N
ASTEI06400 Anopheles stephensi ASTEI06400 N
ACEP16435 Atta cephalotes ACEP16435 N
BGLB001079 Biomphalaria glabrata BGLB001079 N
BGIBMGA011355 Bombyx mori BGIBMGA011355 N
e_gw.5.535.1 Branchiostoma floridae e_gw.5.535.1 I
e_gw.5.534.1 Branchiostoma floridae e_gw.5.534.1 I
Aan_R009659 Calypte anna Aan_R009659 N
DBX1 Canis familiaris ENSCAFG00000009813 N
CLEC012266 Cimex lectularius CLEC012266 N
csin111071 Clonorchis sinensis csin111071 N
CpipJ_CPIJ016099 Culex pipiens CpipJ_CPIJ016099 N
ENSDORG00000013256 Dipodomys ordii ENSDORG00000013256 I
HLX Echinops telfairi ENSETEG00000003298 I
ENSEEUG00000014300 Erinaceus europaeus ENSEEUG00000014300 N
D915_01034 Fasciola hepatica D915_01034 N
ENSFALG00000012045 Ficedula albicollis ENSFALG00000012045 N
ENSGMOG00000002488 Gadus morhua ENSGMOG00000002488 N
ENSGALG00000027554 Gallus gallus ENSGALG00000027554 N
Gfo_R010904 Geospiza fortis Gfo_R010904 N
TTAC_0001113501 Hydatigera taeniaeformis TTAC_0001113501 N
LDEC001875 Leptinotarsa decemlineata LDEC001875 N
LCUP015731 Lucilia cuprina LCUP015731 N
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I
MCINX013655 Melitaea cinxia MCINX013655 N
ENSOPRG00000015148 Ochotona princeps ENSOPRG00000015148 N
Ocbimv22038272m.g Octopus bimaculoides Ocbimv22038272m.g N
T265_04102 Opisthorchis viverrini T265_04102 N
PPAI003680 Phlebotomus papatasi PPAI003680 N
RPRC011993 Rhodnius prolixus RPRC011993 N
SSLN_0001900001 Schistocephalus solidus SSLN_0001900001 N
SCUD_0000356901 Schistosoma curassoni SCUD_0000356901 N
SBAD_0000059701 Soboliphyme baturini SBAD_0000059701 N
SINV13310 Solenopsis invicta SINV13310 N
HLX Sorex araneus ENSSARG00000009476 I
SPER_0000200201 Spirometra erinaceieuropaei SPER_0000200201 N
L892_g2163 Steinernema scapterisci L892_g2163 N
ENSTGUG00000002708 Taeniopygia guttata ENSTGUG00000002708 N
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I
MICALL2 Takifugu rubripes ENSTRUG00000013527 I
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I
TRE_0001634301 Trichobilharzia regenti TRE_0001634301 N
TRE_0001854501 Trichobilharzia regenti TRE_0001854501 N
ENSTBEG00000005783 Tupaia belangeri ENSTBEG00000005783 N
L798_10069 Zootermopsis nevadensis L798_10069 N