SNAI1 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000011499 T088344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.819 0.956
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.819 0.956
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.819 0.956
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.819 0.956
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.819 0.956
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.819 0.956
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.819 0.956
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.819 0.956
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.819 0.945
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.819 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000016886 C2H2 ZF 127 149
ENSCAFP00000016886 C2H2 ZF 153 175
ENSCAFP00000016886 C2H2 ZF 181 203
ENSCAFP00000016886 C2H2 ZF 209 230

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aqu1.209164 Amphimedon queenslandica Aqu1.209164 N
Aqu1.225136 Amphimedon queenslandica Aqu1.225136 N
Aqu1.220383 Amphimedon queenslandica Aqu1.220383 N
Aqu1.220092 Amphimedon queenslandica Aqu1.220092 N
Aqu1.219278 Amphimedon queenslandica Aqu1.219278 N
Aqu1.217592 Amphimedon queenslandica Aqu1.217592 N
Aqu1.216992 Amphimedon queenslandica Aqu1.216992 N
Aqu1.215899 Amphimedon queenslandica Aqu1.215899 N
Aqu1.210475 Amphimedon queenslandica Aqu1.210475 N
Aqu1.200547 Amphimedon queenslandica Aqu1.200547 N
Aqu1.205713 Amphimedon queenslandica Aqu1.205713 N
Aqu1.204680 Amphimedon queenslandica Aqu1.204680 N
Aqu1.203693 Amphimedon queenslandica Aqu1.203693 N
Aqu1.203383 Amphimedon queenslandica Aqu1.203383 N
Aqu1.203266 Amphimedon queenslandica Aqu1.203266 N
Aqu1.202612 Amphimedon queenslandica Aqu1.202612 N
Aqu1.202374 Amphimedon queenslandica Aqu1.202374 N
Aqu1.200775 Amphimedon queenslandica Aqu1.200775 N