CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM14
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000008052
T089366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM14
M08897_2.00
Homo sapiens
NRGGWCYCTAACYH
DRGTTAGRGWCCYN
Misc
Kulakovskiy et al.(2013)
PRD14_HUMAN.H11MO.0.A
0.827
1.000
PRDM14
M09509_2.00
Homo sapiens
RSTTAGRGACCY
RGGTCYCTAASY
Misc
Heinz et al.(2010)
H1-PRDM14_GSE22767
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000014861
C2H2 ZF
400
421
YRCERCGKVFTYKYYRDKHLKY
ENSCJAP00000014861
C2H2 ZF
432
455
FPCSLCKRSFEKRDRLRIHILHVH
ENSCJAP00000014861
C2H2 ZF
461
483
HKCSTCGKCFSQSSSLNKHMRVH
ENSCJAP00000014861
C2H2 ZF
489
511
YQCVYCTKRFTASSILRTHIRQH
ENSCJAP00000014861
C2H2 ZF
517
540
FKCKYCGKSFASHAAHDSHVRRSH
ENSCJAP00000014861
C2H2 ZF
546
568
CSCSICGKIFSDQETFYSHMKFH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15058.m1
Manihot esculenta
cassava15058.m1
N
PRUPE_ppa011458mg
Prunus persica
PRUPE_ppa011458mg
N
SapurV1A.0151s0140
Salix purpurea
SapurV1A.0151s0140
N
SapurV1A.5427s0010
Salix purpurea
SapurV1A.5427s0010
N
Traes_1BL_C202F3DE1
Triticum aestivum
Traes_1BL_C202F3DE1
N
GRMZM2G408887
Zea mays
GRMZM2G408887
N