CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSCPOG00000004042 *(Cavia porcellus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSCPOG00000004042	T089818_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZNF449 M04560_2.00	Homo sapiens	NTGYTKGCWCGCGAB	VTCGCGWGCMARCAN	SELEX Yin et al.(2017) ZNF449_eDBD_HT-SELEX_1	0.823	0.981
ZNF449 M04561_2.00	Homo sapiens	RCGCCCAACC	GGTTGGGCGY	SELEX Yin et al.(2017) ZNF449_eDBD_HT-SELEX_2	0.823	0.981
ZNF449 M08344_2.00	Homo sapiens	NNVAGCCCARCCHNNNNNNNN	NNNNNNNNDGGYTGGGCTBNN	ChIP-seq Schmitges et al.(2016) Q6P9G9_1-7.RCADE	0.823	0.981
ZNF449 M08922_2.00	Homo sapiens	VAGCCCARCCN	NGGYTGGGCTB	Misc Kulakovskiy et al.(2013) ZN449_HUMAN.H11MO.0.C	0.823	0.981
ZNF449 M04562_2.00	Homo sapiens	MMGCCCMACC	GGTKGGGCKK	SELEX Yin et al.(2017) ZNF449_eDBD_Methyl-HT-SELEX_1	0.823	0.981
ZNF449 M04563_2.00	Homo sapiens	NTGYTKGCDCGCGWB	VWCGCGHGCMARCAN	SELEX Yin et al.(2017) ZNF449_eDBD_Methyl-HT-SELEX_2	0.823	0.981
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Cavia porcellus* TFs