zbtb18 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000028228 T090874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.821 0.978
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.821 0.978
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.821 0.978
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.821 0.978
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.821 0.978
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.821 0.978
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.821 0.978
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.821 0.978
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.821 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000141791 C2H2 ZF 385 407
ENSDARP00000141791 C2H2 ZF 426 447
ENSDARP00000141791 C2H2 ZF 453 475
ENSDARP00000141791 C2H2 ZF 481 504

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013250 Ailuropoda melanoleuca ENSAMEG00000013250 I 0.000
SALL4 Bos taurus ENSBTAG00000003101 I 0.000
ENSCJAG00000021107 Callithrix jacchus ENSCJAG00000021107 N 0.000
ENSCAFG00000011738 Canis familiaris ENSCAFG00000011738 I 0.000
ENSCSAG00000015269 Chlorocebus sabaeus ENSCSAG00000015269 I 0.000
SALL4 Dasypus novemcinctus ENSDNOG00000040633 I 0.000
SALL4 Equus caballus ENSECAG00000018533 N 0.000
SALL4 Erinaceus europaeus ENSEEUG00000003649 I 0.000
SALL4 Felis catus ENSFCAG00000002822 I 0.000
SALL4 Gorilla gorilla ENSGGOG00000001832 I 0.000
HelroG138365 Helobdella robusta HelroG138365 N 0.000
SALL4 Homo sapiens ENSG00000101115 D 0.000
ENSSTOG00000025002 Ictidomys tridecemlineatus ENSSTOG00000025002 I 0.000
SALL4 Loxodonta africana ENSLAFG00000004309 I 0.000
ENSP00000217086 Macaca fascicularis ENSP00000217086 I 0.000
SALL4 Macaca mulatta ENSMMUG00000003870 I 0.000
SALL4 Microcebus murinus ENSMICG00000000027 I 0.000
ENSMPUG00000017543 Mustela putorius furo ENSMPUG00000017543 I 0.000
Sall4 Mus musculus ENSMUSG00000027547 D 0.000
ENSMLUG00000008405 Myotis lucifugus ENSMLUG00000008405 I 0.000
ENSMLUG00000007060 Myotis lucifugus ENSMLUG00000007060 I 0.000
ENSNLEG00000007013 Nomascus leucogenys ENSNLEG00000007013 I 0.000
SALL4 Ochotona princeps ENSOPRG00000011640 I 0.000
Ogr03507 Ophisaurus gracilis Ogr03507 N 0.000
SALL4 Oryctolagus cuniculus ENSOCUG00000011797 I 0.000
SALL4 Otolemur garnettii ENSOGAG00000013799 I 0.000
SALL4 Pan troglodytes ENSPTRG00000013631 I 0.000
ENSPANG00000021792 Papio anubis ENSPANG00000021792 I 0.000
ENSPPYG00000011138 Pongo abelii ENSPPYG00000011138 I 0.000
SALL4 Pteropus vampyrus ENSPVAG00000002075 I 0.000
Sall4 Rattus norvegicus ENSRNOG00000050035 I 0.000
SALL4 Sus scrofa ENSSSCG00000007479 I 0.000
ENSTGUG00000018244 Taeniopygia guttata ENSTGUG00000018244 N 0.000
ENSTSYG00000007359 Tarsius syrichta ENSTSYG00000007359 I 0.000
SALL4 Tursiops truncatus ENSTTRG00000007753 I 0.000