im:7142702 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000067727 T090995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.823 0.956
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.823 0.956
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.921
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.921
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000088314 C2H2 ZF 368 389
ENSDARP00000088314 C2H2 ZF 395 417
ENSDARP00000088314 C2H2 ZF 696 718
ENSDARP00000088314 C2H2 ZF 724 746
ENSDARP00000088314 C2H2 ZF 754 777

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CMU_000420 Cryptosporidium muris CMU_000420 N
cgd3_2970 Cryptosporidium parvum cgd3_2970 N