CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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atmin
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000068601
T091000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000090059
C2H2 ZF
91
120
YCCPIEGCPRGPNRPFSQFSLVKQHFMKMH
ENSDARP00000090059
C2H2 ZF
125
146
HKCLKCSNGYSTEWDLRRHVED
ENSDARP00000090059
C2H2 ZF
145
174
EDCGRTYSCTCGCPYASRAALLSHIYRTGH
ENSDARP00000117310
C2H2 ZF
90
119
YCCPIEGCPRGPNRPFSQFSLVKQHFMKMH
ENSDARP00000117310
C2H2 ZF
124
145
HKCLKCSNGYSTEWDLRRHVED
ENSDARP00000117310
C2H2 ZF
144
173
EDCGRTYSCTCGCPYASRAALLSHIYRTGH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000010877
Gadus morhua
ENSGMOG00000010877
N
0.792
atmin
Gasterosteus aculeatus
ENSGACG00000015975
N
0.795