CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM2
(
Erinaceus europaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSEEUG00000014607
T093726_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000013317
C2H2 ZF
311
333
FPCQHCERKFTTKQGLERHMHIH
ENSEEUP00000013317
C2H2 ZF
341
363
FKCKYCGKAFGTQINRRRHERRH
ENSEEUP00000013317
C2H2 ZF
1082
1104
FVCNVCELPFLSIKDLTKHLSVH
ENSEEUP00000013317
C2H2 ZF
1139
1162
FVCSVCKKEFAFLCNLQQHQRDLH
Links
Other
C2H2 ZF
family TFs
Other
Erinaceus europaeus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_11444
Aegilops tauschii
F775_11444
N
F775_25475
Aegilops tauschii
F775_25475
N
BRADI1G32950
Brachypodium distachyon
BRADI1G32950
N
BRADI2G07910
Brachypodium distachyon
BRADI2G07910
N
BRADI2G27040
Brachypodium distachyon
BRADI2G27040
N
Traes_2AL_232DE3B52
Triticum aestivum
Traes_2AL_232DE3B52
N
Traes_2BL_068034A6D
Triticum aestivum
Traes_2BL_068034A6D
N
Traes_2DL_01DEC201E
Triticum aestivum
Traes_2DL_01DEC201E
N
Traes_3DL_575C5670C
Triticum aestivum
Traes_3DL_575C5670C
N
Traes_4AL_161D3D25E
Triticum aestivum
Traes_4AL_161D3D25E
N
Traes_5BS_B7F04C1A5
Triticum aestivum
Traes_5BS_B7F04C1A5
N
Traes_5DL_34CCC8525
Triticum aestivum
Traes_5DL_34CCC8525
N
Traes_6BL_3F20B009E
Triticum aestivum
Traes_6BL_3F20B009E
N
Traes_7BL_8492576A6
Triticum aestivum
Traes_7BL_8492576A6
N
TRIUR3_06404
Triticum urartu
TRIUR3_06404
N
TRIUR3_17083
Triticum urartu
TRIUR3_17083
N