GLIS2 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000006418 T093879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.827 1.000
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.827 0.986
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.827 0.986
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.827 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000005210 C2H2 ZF 233 255
ENSETEP00000005210 C2H2 ZF 261 285
ENSETEP00000005210 C2H2 ZF 291 315

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.2902s0345 Boechera stricta Bostr.2902s0345 N
Bostr.10273s0444 Boechera stricta Bostr.10273s0444 N
Bo9g163480 Brassica oleracea Bo9g163480 N
Bra008646 Brassica rapa Bra008646 N
DDB_G0280491 Dictyostelium discoideum DDB_G0280491 N
fgeneshDP_pg.C_scaffold_97000010 Dictyostelium purpureum fgeneshDP_pg.C_scaffold_97000010 N
Thhalv10013525m.g Eutrema salsugineum Thhalv10013525m.g N
HpaG800546 Hyaloperonospora arabidopsidis HpaG800546 N
HpaG806838 Hyaloperonospora arabidopsidis HpaG806838 N
estExt_fgenesh1_kg.C_30353 Phytophthora capsici estExt_fgenesh1_kg.C_30353 N
fgenesh_scip_prom.28083.8513 Phytophthora lateralis fgenesh_scip_prom.28083.8513 N
Phyra72995 Phytophthora ramorum Phyra72995 N
Phyra80034 Phytophthora ramorum Phyra80034 N
Physo144310 Phytophthora sojae Physo144310 N
EFA82378.1 Polysphondylium pallidum EFA82378.1 N
maker-pag1_scaffold_15-snap-gene-0.94 Pythium aphanidermatum maker-pag1_scaffold_15-snap-gene-0.94 N
maker-par_contig_498-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_498-fgenesh-gene-0.0 N
maker-par_contig_1307-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1307-fgenesh-gene-0.1 N
maker-pir_contig_962-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_962-fgenesh-gene-0.0 N
maker-pir_contig_1259-snap-gene-0.3 Pythium irregulare maker-pir_contig_1259-snap-gene-0.3 N
PYU1_G009435 Pythium ultimum PYU1_G009435 N