ENSETEG00000016371 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000016371 T094070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.816 0.912
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.816 0.912
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.816 0.912
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.816 0.912
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.816 0.912
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.816 0.912
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.816 0.912
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.816 0.912
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.813 0.890
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.813 0.890
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000013276 C2H2 ZF 30 52
ENSETEP00000013276 C2H2 ZF 56 78
ENSETEP00000013276 C2H2 ZF 84 106
ENSETEP00000013276 C2H2 ZF 112 133

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_12196 Aegilops tauschii F775_12196 N
BRADI3G07987 Brachypodium distachyon BRADI3G07987 N
Bo8g082820 Brassica oleracea Bo8g082820 N
Bo8g082840 Brassica oleracea Bo8g082840 N
Thhalv10010289m.g Eutrema salsugineum Thhalv10010289m.g N
MLOC_77437 Hordeum vulgare MLOC_77437 N
mgf021292m Mimulus guttatus mgf021292m N
OBART01G20650 Oryza barthii OBART01G20650 N
OB05G10170 Oryza brachyantha OB05G10170 N
OLONG_021595 Oryza longistaminata OLONG_021595 N
ONIVA01G23240 Oryza nivara ONIVA01G23240 N
OPUNC01G20840 Oryza punctata OPUNC01G20840 N
ORUFI01G23320 Oryza rufipogon ORUFI01G23320 N
Traes_7AL_ED205638C Triticum aestivum Traes_7AL_ED205638C N
Traes_7DL_2B62A6D74 Triticum aestivum Traes_7DL_2B62A6D74 N
TRIUR3_11795 Triticum urartu TRIUR3_11795 N