ENSFALG00000000489 (Ficedula albicollis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSFALG00000000489 T094166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF3
M08320_2.00 		Homo sapiens
TTCCCNNSB
VSNNGGGAA		 ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE 		0.809 0.956
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.793 0.879
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.793 0.879
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.793 0.879
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.793 0.879
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.793 0.879
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.793 0.879
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.793 0.879
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.793 0.879
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.773 0.846
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.773 0.846
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000000503 C2H2 ZF 114 136
ENSFALP00000000503 C2H2 ZF 142 164
ENSFALP00000000503 C2H2 ZF 170 192
ENSFALP00000000503 C2H2 ZF 198 219

Links

Other C2H2 ZF family TFs
Other Ficedula albicollis TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I
TGA10 Arabidopsis thaliana AT5G06839 D
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I
Bo3g004060 Brassica oleracea Bo3g004060 I
Bo9g175780 Brassica oleracea Bo9g175780 I
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I
Carubv10003744m.g Capsella rubella Carubv10003744m.g I
Ciclev10031441m.g Citrus clementina Ciclev10031441m.g I
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I
GLYMA03G29825 Glycine max GLYMA03G29825 I
GLYMA19G32715 Glycine max GLYMA19G32715 I
LPERR05G14450 Leersia perrieri LPERR05G14450 I
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I
OBART05G18270 Oryza barthii OBART05G18270 I
OB05G26080 Oryza brachyantha OB05G26080 I
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I
BGIOSGA019942 Oryza indica BGIOSGA019942 I
OLONG_005656 Oryza longistaminata OLONG_005656 I
OMERI05G15750 Oryza meridionalis OMERI05G15750 I
ONIVA05G19180 Oryza nivara ONIVA05G19180 I
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I
OS05G0443900 Oryza sativa OS05G0443900 I
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I