PATZ1 (Gallus gallus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGALG00000006934 T095875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.824 0.985
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.824 0.985
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000011217 C2H2 ZF 295 317
ENSGALP00000011217 C2H2 ZF 359 380
ENSGALP00000011217 C2H2 ZF 386 408
ENSGALP00000011217 C2H2 ZF 416 439
ENSGALP00000011217 C2H2 ZF 445 467
ENSGALP00000011217 C2H2 ZF 499 521

Links

Other C2H2 ZF family TFs
Other Gallus gallus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015013 Ailuropoda melanoleuca ENSAMEG00000015013 I
ENSAMEG00000019633 Ailuropoda melanoleuca ENSAMEG00000019633 I
Alligator_sinensis_CCG012594.1 Alligator sinensis Alligator_sinensis_CCG012594.1 I
ENSAPLG00000002295 Anas platyrhynchos ENSAPLG00000002295 I
Afo_R014889 Aptenodytes forsteri Afo_R014889 I
ENSAMXG00000026066 Astyanax mexicanus ENSAMXG00000026066 I
ENSAMXG00000026284 Astyanax mexicanus ENSAMXG00000026284 I
BGLB010755 Biomphalaria glabrata BGLB010755 I
ENSBTAP00000021340-D1 Bos grunniens ENSBTAP00000021340-D1 I
ENSP00000356708-D1 Bos grunniens ENSP00000356708-D1 I
OLIG3 Bos taurus ENSBTAG00000008749 I
Brh_R007937 Buceros rhinoceros Brh_R007937 I
OLIG2 Callithrix jacchus ENSCJAG00000009439 I
Aan_R009789 Calypte anna Aan_R009789 I
OLIG3 Canis familiaris ENSCAFG00000000265 I
OLIG2 Canis familiaris ENSCAFG00000028529 I
CapteG41307 Capitella teleta CapteG41307 I
CapteG65387 Capitella teleta CapteG65387 I
OLIG3 Cavia porcellus ENSCPOG00000007516 I
OLIG2 Cavia porcellus ENSCPOG00000011590 I
Cmyd_10005462 Chelonia mydas Cmyd_10005462 I
Cmyd_10011949 Chelonia mydas Cmyd_10011949 I
ENSCSAG00000000185 Chlorocebus sabaeus ENSCSAG00000000185 I
ENSCSAG00000018687 Chlorocebus sabaeus ENSCSAG00000018687 I
OLIG3 Choloepus hoffmanni ENSCHOG00000005165 I
CGI_10019998 Crassostrea gigas CGI_10019998 I
CGI_10023146 Crassostrea gigas CGI_10023146 I
olig2 Danio rerio ENSDARG00000040946 I
OLIG3 Dasypus novemcinctus ENSDNOG00000042405 I
OLIG2 Dasypus novemcinctus ENSDNOG00000047420 I
ENSDORG00000006743 Dipodomys ordii ENSDORG00000006743 I
Olig3 Dipodomys ordii ENSDORG00000013033 I
OLIG3 Echinops telfairi ENSETEG00000004562 I
ECPE_0001595001 Echinostoma caproni ECPE_0001595001 I
D915_09810 Fasciola hepatica D915_09810 I
OLIG3 Felis catus ENSFCAG00000030246 I
ENSFALG00000012862 Ficedula albicollis ENSFALG00000012862 I
ENSGMOG00000018006 Gadus morhua ENSGMOG00000018006 I
ENSGMOG00000018584 Gadus morhua ENSGMOG00000018584 I
OLIG3 Gallus gallus ENSGALG00000013862 I
ENSGALG00000027381 Gallus gallus ENSGALG00000027381 I
olig2 Gasterosteus aculeatus ENSGACG00000002152 I
OLIG3 Gasterosteus aculeatus ENSGACG00000010412 I
Gfo_R003786 Geospiza fortis Gfo_R003786 I
OLIG2 Gorilla gorilla ENSGGOG00000008780 I
OLIG3 Homo sapiens ENSG00000177468 D
OLIG2 Homo sapiens ENSG00000205927 D
ENSSTOG00000020214 Ictidomys tridecemlineatus ENSSTOG00000020214 I
ENSSTOG00000020899 Ictidomys tridecemlineatus ENSSTOG00000020899 I
ENSLACG00000005047 Latimeria chalumnae ENSLACG00000005047 I
ENSLACG00000005481 Latimeria chalumnae ENSLACG00000005481 I
ENSLOCG00000017350 Lepisosteus oculatus ENSLOCG00000017350 I
ENSLOCG00000017506 Lepisosteus oculatus ENSLOCG00000017506 I
LotgiG70673 Lottia gigantea LotgiG70673 I
OLIG3 Loxodonta africana ENSLAFG00000005655 I
OLIG2 Loxodonta africana ENSLAFG00000028347 I
ENSP00000356708 Macaca fascicularis ENSP00000356708 I
OLIG2 Macaca mulatta ENSMMUG00000017652 I
ENSMMUG00000029441 Macaca mulatta ENSMMUG00000029441 I
ENSMEUG00000002914 Macropus eugenii ENSMEUG00000002914 I
ENSMICG00000004313 Microcebus murinus ENSMICG00000004313 I
OLIG3 Monodelphis domestica ENSMODG00000017418 I
OLIG2 Monodelphis domestica ENSMODG00000025338 I
ENSMPUG00000001227 Mustela putorius furo ENSMPUG00000001227 I
ENSMPUG00000018873 Mustela putorius furo ENSMPUG00000018873 I
Olig2 Mus musculus ENSMUSG00000039830 D
Olig3 Mus musculus ENSMUSG00000045591 D
Myotis_brandtii_OLIG3_10035715 Myotis brandtii Myotis_brandtii_OLIG3_10035715 I
OLIG3 Myotis lucifugus ENSMLUG00000026705 I
ENSNLEG00000019305 Nomascus leucogenys ENSNLEG00000019305 I
OLIG3 Ochotona princeps ENSOPRG00000003267 I
Ocbimv22001042m.g Octopus bimaculoides Ocbimv22001042m.g I
Ogr17936 Ophisaurus gracilis Ogr17936 I
ENSONIG00000017079 Oreochromis niloticus ENSONIG00000017079 I
ENSONIG00000020727 Oreochromis niloticus ENSONIG00000020727 I
OLIG3 Ornithorhynchus anatinus ENSOANG00000014796 I
OLIG3 Oryctolagus cuniculus ENSOCUG00000017289 I
olig2 Oryzias latipes ENSORLG00000010211 I
OLIG3 Otolemur garnettii ENSOGAG00000011977 I
OLIG2 Otolemur garnettii ENSOGAG00000026818 I
ENSOARG00000002572 Ovis aries ENSOARG00000002572 I
OLIG2 Pan troglodytes ENSPTRG00000013863 I
OLIG3 Pan troglodytes ENSPTRG00000018643 I
ENSPANG00000006465 Papio anubis ENSPANG00000006465 I
ENSPANG00000007664 Papio anubis ENSPANG00000007664 I
ENSPSIG00000001778 Pelodiscus sinensis ENSPSIG00000001778 I
ENSPSIG00000001988 Pelodiscus sinensis ENSPSIG00000001988 I
ENSPFOG00000004604 Poecilia formosa ENSPFOG00000004604 I
ENSPFOG00000015805 Poecilia formosa ENSPFOG00000015805 I
ENSPFOG00000019968 Poecilia formosa ENSPFOG00000019968 I
Pvit_10685 Pogona vitticeps Pvit_10685 I
Pvit_17282 Pogona vitticeps Pvit_17282 I
ENSPPYG00000011369 Pongo abelii ENSPPYG00000011369 I
ENSPPYG00000017041 Pongo abelii ENSPPYG00000017041 I
OLIG3 Procavia capensis ENSPCAG00000002488 I
OLIG2 Procavia capensis ENSPCAG00000005657 I
Olig3 Rattus norvegicus ENSRNOG00000012057 I
Olig2 Rattus norvegicus ENSRNOG00000028658 I
Sakowv30018772m.g Saccoglossus kowalevskii Sakowv30018772m.g I
ENSSHAG00000007183 Sarcophilus harrisii ENSSHAG00000007183 I
OLIG3 Sus scrofa ENSSSCG00000004155 I
OLIG3 Taeniopygia guttata ENSTGUG00000010892 I
olig2 Takifugu rubripes ENSTRUG00000014944 I
olig2 Tetraodon nigroviridis ENSTNIG00000000234 I
olig2 Tetraodon nigroviridis ENSTNIG00000003641 I
OLIG3 Tetraodon nigroviridis ENSTNIG00000017004 I
OLIG3 Tupaia belangeri ENSTBEG00000014468 I
olig3 Xenopus tropicalis XB-GENE-919789 I
XP_002938491 Xenopus tropicalis XP_002938491 I
ENSXMAG00000001116 Xiphophorus maculatus ENSXMAG00000001116 I
ENSXMAG00000018245 Xiphophorus maculatus ENSXMAG00000018245 I