CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL11A
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000007337
T096248_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.827
1.000
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.827
1.000
BCL11A
M10187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.827
1.000
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.806
0.947
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.806
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000007181
C2H2 ZF
378
399
SCEFCGKTFKFQSNLVVHRRSH
ENSGGOP00000007181
C2H2 ZF
405
427
YKCNLCDHACTQASKLKRHMKTH
ENSGGOP00000007181
C2H2 ZF
742
764
DTCEYCGKVFKNCSNLTVHRRSH
ENSGGOP00000007181
C2H2 ZF
770
792
YKCELCNYACAQSSKLTRHMKTH
ENSGGOP00000007181
C2H2 ZF
800
823
YKCEICKMPFSVYSTLEKHMKKWH
ENSGGOP00000023481
C2H2 ZF
170
193
YTCTTCKQPFTSAWFLLQHAQNTH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF11060
Drosophila ananassae
FBgn0088100
I
GG23211
Drosophila erecta
FBgn0115362
I
GH21743
Drosophila grimshawi
FBgn0129204
I
Adf1
Drosophila melanogaster
FBgn0000054
D
GL11108
Drosophila persimilis
FBgn0148718
I
GA13983
Drosophila pseudoobscura
FBgn0074015
I
GM20885
Drosophila sechellia
FBgn0175766
I
GD10415
Drosophila simulans
FBgn0182186
I
GJ22167
Drosophila virilis
FBgn0209280
I
GK23084
Drosophila willistoni
FBgn0225046
I
GE19065
Drosophila yakuba
FBgn0236427
I
LCUP004072
Lucilia cuprina
LCUP004072
I
LCUP004080
Lucilia cuprina
LCUP004080
I
MDOA005199
Musca domestica
MDOA005199
I
MDOA009315
Musca domestica
MDOA009315
I