ENSGMOG00000018718 (Gadus morhua)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGMOG00000018718 T096917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.816 0.967
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.816 0.967
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.816 0.967
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.816 0.967
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.816 0.967
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.816 0.967
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.816 0.967
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.816 0.967
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.816 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000020107 C2H2 ZF 418 440
ENSGMOP00000020107 C2H2 ZF 459 480
ENSGMOP00000020107 C2H2 ZF 486 508
ENSGMOP00000020107 C2H2 ZF 514 537

Links

Other C2H2 ZF family TFs
Other Gadus morhua TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007251 Anopheles albimanus AALB007251 N 0.000
AATE009222 Anopheles atroparvus AATE009222 N 0.000
ADAC009867 Anopheles darlingi ADAC009867 N 0.000
ADIR003240 Anopheles dirus ADIR003240 N 0.000
AFAF013191 Anopheles farauti AFAF013191 N 0.000
AFUN008608 Anopheles funestus AFUN008608 N 0.000
AMIN000325 Anopheles minimus AMIN000325 N 0.000
ASIS004073 Anopheles sinensis ASIS004073 N 0.000
BGIBMGA001425 Bombyx mori BGIBMGA001425 N 0.000
MDOA010732 Musca domestica MDOA010732 N 0.000