CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000003465
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000003465
T096968_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000003888
C2H2 ZF
222
244
FCNACGKTFYDKGTLKIHYNAVH
ENSLACP00000003888
C2H2 ZF
249
271
HRCTIDGCNMVFSSLRSRNRHSA
ENSLACP00000003888
C2H2 ZF
816
839
ITCNICHKMYSNKGTLRVHYKTVH
ENSLACP00000003888
C2H2 ZF
844
867
HKCKVPGCNMMFSSVRSRNRHSQN
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G21460
Brachypodium distachyon
BRADI3G21460
N
GLYMA05G23330
Glycine max
GLYMA05G23330
N
GLYMA17G16730
Glycine max
GLYMA17G16730
N
ORGLA10G0001900
Oryza glaberrima
ORGLA10G0001900
N
BGIOSGA032415
Oryza indica
BGIOSGA032415
N
OLONG_008997
Oryza longistaminata
OLONG_008997
N
OPUNC10G00240
Oryza punctata
OPUNC10G00240
N
OS10G0104300
Oryza sativa
OS10G0104300
N
Pavir.Ib02672
Panicum virgatum
Pavir.Ib02672
N
Pavir.Ib02673
Panicum virgatum
Pavir.Ib02673
N
Si036673m.g
Setaria italica
Si036673m.g
N
Si039393m.g
Setaria italica
Si039393m.g
N
Sb01g027411
Sorghum bicolor
Sb01g027411
N
GRMZM2G150327
Zea mays
GRMZM2G150327
N