CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZBTB18
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000002879
T097227_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827
1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827
1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827
1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG
CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827
1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827
1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827
1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827
1.000
ZBTB18
M10283_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827
1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000027858
C2H2 ZF
375
397
FMCPLCNKVFPSPHILQIHLSTH
ENSLAFP00000027858
C2H2 ZF
416
437
TCSLCGKTFSCMYTLKRHERTH
ENSLAFP00000027858
C2H2 ZF
443
465
YTCTQCGKSFQYSHNLSRHAVVH
ENSLAFP00000027858
C2H2 ZF
471
494
HACKWCERRFTQSGDLYRHIRKFH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_027820
Acremonium chrysogenum
ACRE_027820
N
0.000
BBA_05381
Beauveria bassiana
BBA_05381
N
0.000
BGHDH14_bgh02200
Blumeria graminis
BGHDH14_bgh02200
N
0.000
Bcin11g00690
Botrytis cinerea
Bcin11g00690
N
0.000
CFIO01_08107
Colletotrichum fioriniae
CFIO01_08107
N
0.000
GLRG_08850
Colletotrichum graminicola
GLRG_08850
N
0.000
Cob_07699
Colletotrichum orbiculare
Cob_07699
N
0.000
CSUB01_05147
Colletotrichum sublineola
CSUB01_05147
N
0.000
CCM_04601
Cordyceps militaris
CCM_04601
N
0.000
EV44_g5282
Erysiphe necator
EV44_g5282
N
0.000
FFUJ_06082
Fusarium fujikuroi
FFUJ_06082
N
0.000
FGRRES_08431
Fusarium graminearum
FGRRES_08431
N
0.000
FOXG_03227
Fusarium oxysporum
FOXG_03227
N
0.000
FPSE_05040
Fusarium pseudograminearum
FPSE_05040
N
0.000
NechaG91927
Fusarium solani
NechaG91927
N
0.000
GGTG_01655
Gaeumannomyces graminis
GGTG_01655
N
0.000
MGG_08875
Magnaporthe oryzae
MGG_08875
N
0.000
MBM_05874
Marssonina brunnea
MBM_05874
N
0.000
MANI_028549
Metarhizium anisopliae
MANI_028549
N
0.000
MAJ_00099
Metarhizium majus
MAJ_00099
N
0.000
X797_000578
Metarhizium robertsii
X797_000578
N
0.000
MYCTH_2306870
Myceliophthora thermophila
MYCTH_2306870
N
0.000
fgenesh1_pm.sca_2_chr3_3_0000327
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000327
N
0.000
NCU04773
Neurospora crassa
NCU04773
N
0.000
estExt_Genewise1Plus.C_60317
Neurospora discreta
estExt_Genewise1Plus.C_60317
N
0.000
NEUTE1DRAFT_87140
Neurospora tetrasperma
NEUTE1DRAFT_87140
N
0.000
PFICI_03093
Pestalotiopsis fici
PFICI_03093
N
0.000
PODANS_4_8950
Podospora anserina
PODANS_4_8950
N
0.000
GMDG_05689
Pseudogymnoascus destructans
GMDG_05689
N
0.000
V499_05253
Pseudogymnoascus pannorum
V499_05253
N
0.000
SMAC_03408
Sordaria macrospora
SMAC_03408
N
0.000
S40288_06430
Stachybotrys chartarum
S40288_06430
N
0.000
S40285_04802
Stachybotrys chlorohalonata
S40285_04802
N
0.000
VHEMI06811
Torrubiella hemipterigena
VHEMI06811
N
0.000
TRIATDRAFT_223478
Trichoderma atroviride
TRIATDRAFT_223478
N
0.000
TRIREDRAFT_122767
Trichoderma reesei
TRIREDRAFT_122767
N
0.000
TRIVIDRAFT_67483
Trichoderma virens
TRIVIDRAFT_67483
N
0.000
VDBG_08112
Verticillium albo atrum
VDBG_08112
N
0.000
VDBG_08112
Verticillium alfalfae
VDBG_08112
N
0.000
VDAG_01608
Verticillium dahliae
VDAG_01608
N
0.000