CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM12
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000006979
T097288_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000005864
C2H2 ZF
249
271
MRCVICHRGFNSRSNLRSHMRIH
ENSLAFP00000005864
C2H2 ZF
277
299
FVCRFCNRRFSQSSTLRNHVRLH
ENSLAFP00000005864
C2H2 ZF
305
329
YKCQVCQSAYSQLAGLRAHQKSARH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFAF010569
Anopheles farauti
AFAF010569
N
AGAP011150
Anopheles gambiae
AGAP011150
N
AGAP012770
Anopheles gambiae
AGAP012770
N
AMAM005454
Anopheles maculatus
AMAM005454
N
AMEC005504
Anopheles melas
AMEC005504
N
AQUA005116
Anopheles quadriannulatus
AQUA005116
N
ASTEI05655
Anopheles stephensi
ASTEI05655
N