CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000013557
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000013557
T097741_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IKZF2
M10105_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.768
0.859
IKZF2
M10106_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.768
0.859
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.759
0.848
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.759
0.848
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.759
0.848
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.759
0.848
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.759
0.848
IKZF1
M10304_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.759
0.848
IKZF1
M10305_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.759
0.848
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA
TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.759
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000016715
C2H2 ZF
119
141
LSCDICGLACVSLNVLLVHKRSH
ENSLOCP00000016715
C2H2 ZF
147
169
FHCTQCGASFTQKGNLLRHIKLH
ENSLOCP00000016715
C2H2 ZF
175
197
FKCHMCSYACRRRDALSGHLRTH
ENSLOCP00000016715
C2H2 ZF
203
226
YKCNYCGRSYKQRSSLEEHKERCH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_13485
Ancylostoma caninum
ANCCAN_13485
N
0.000
ANCCAN_25221
Ancylostoma caninum
ANCCAN_25221
N
0.000
ANCDUO_14303
Ancylostoma duodenale
ANCDUO_14303
I
0.000
DICVIV_05565
Dictyocaulus viviparus
DICVIV_05565
N
0.000
HCOI00616300
Haemonchus contortus
HCOI00616300
N
0.000
HCOI01640400
Haemonchus contortus
HCOI01640400
N
0.000
HPBE_0000046001
Heligmosomoides bakeri
HPBE_0000046001
N
0.000
LLOJ006612
Lutzomyia longipalpis
LLOJ006612
I
0.000
NBR_0001565201
Nippostrongylus brasiliensis
NBR_0001565201
N
0.000
PPAI002842
Phlebotomus papatasi
PPAI002842
I
0.000
TELCIR_00857
Teladorsagia circumcincta
TELCIR_00857
N
0.000
TELCIR_23222
Teladorsagia circumcincta
TELCIR_23222
N
0.000