CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM1
(
Meleagris gallopavo
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMGAG00000013524
T098228_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000014296
C2H2 ZF
562
584
YECNVCSKTFGQLSNLKVHLRVH
ENSMGAP00000014296
C2H2 ZF
590
612
FKCQTCNKGFTQLAHLQKHYLVH
ENSMGAP00000014296
C2H2 ZF
618
640
HECQVCHKRFSSTSNLKTHLRLH
ENSMGAP00000014296
C2H2 ZF
646
668
YQCKLCPAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Meleagris gallopavo
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_076870
Acremonium chrysogenum
ACRE_076870
I
0.000
FFUJ_05561
Fusarium fujikuroi
FFUJ_05561
I
0.000
FOXG_15666
Fusarium oxysporum
FOXG_15666
I
0.000
NechaG67823
Fusarium solani
NechaG67823
I
0.000
FVEG_13127
Fusarium verticillioides
FVEG_13127
I
0.000
CMQ_1792
Grosmannia clavigera
CMQ_1792
I
0.000
estExt_Genewise1Plus.C_sca_54_chr3_4_00128
Nectria haematococca
estExt_Genewise1Plus.C_sca_54_chr3_4_00128
I
0.000
HPODL_02490
Ogataea parapolymorpha
HPODL_02490
N
0.000
SPBR_05968
Sporothrix brasiliensis
SPBR_05968
I
0.000
HMPREF1624_04224
Sporothrix schenckii
HMPREF1624_04224
I
0.000
S40288_02997
Stachybotrys chartarum
S40288_02997
I
0.000
S40285_07591
Stachybotrys chlorohalonata
S40285_07591
I
0.000
PV09_05319
Verruconis gallopava
PV09_05319
I
0.000