CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RREB1
(
Monodelphis domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMODG00000009892
T099930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RREB1
M02665_2.00
Homo sapiens
MCMCMAMMCAMCMMCHMMSV
BSKKDGKKGKTGKKTKGKGK
SELEX
Mathelier et al.(2014)
MA0073.1
0.813
0.953
RREB1
M10203_2.00
Homo sapiens
MCCCAAMCMMMCMM
KKGKKKGKTTGGGK
Transfac
Matys et al.(2006)
V$RREB1_01
0.813
0.953
RREB1
M10204_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB1_Q5
0.813
0.953
RREB1
M10205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB_Q5
0.813
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000012384
C2H2 ZF
66
88
YTCPLCEKICTTQHQLTMHIRQH
ENSMODP00000012384
C2H2 ZF
97
119
HSCSICGKSLSSASSLDRHMLVH
ENSMODP00000012384
C2H2 ZF
125
147
YKCSVCGQSFTTNGNMHRHMKIH
ENSMODP00000012384
C2H2 ZF
645
667
YPCRFCSQVFAFSGVLRAHVRSH
ENSMODP00000012384
C2H2 ZF
673
695
YQCNICDYIAADKAALIRHLRTH
ENSMODP00000012384
C2H2 ZF
701
724
YICKICHYPFTVKANCERHLRKKH
ENSMODP00000012384
C2H2 ZF
755
777
TVCRLCGEDLKHYRALRIHMRTH
ENSMODP00000012384
C2H2 ZF
791
814
FECKECGTAFSTKRNCVHHVLKQH
ENSMODP00000012384
C2H2 ZF
1229
1251
ISCPYCPRVFPWASSLQRHMLTH
ENSMODP00000012384
C2H2 ZF
1257
1280
YPCQKCDAFFSTKSNCERHQLRKH
ENSMODP00000012384
C2H2 ZF
1540
1562
KVCTVCNKRFWSLQDLTRHMRSH
ENSMODP00000012384
C2H2 ZF
1568
1590
YKCQTCERTFTLKHSLVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Monodelphis domestica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy