Prdm6 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000069378 T101433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000089513 C2H2 ZF 474 495
ENSMUSP00000089513 C2H2 ZF 502 524
ENSMUSP00000089513 C2H2 ZF 530 552
ENSMUSP00000089513 C2H2 ZF 558 579
ENSMUSP00000111056 C2H2 ZF 82 103
ENSMUSP00000111056 C2H2 ZF 110 132
ENSMUSP00000111056 C2H2 ZF 138 160
ENSMUSP00000111056 C2H2 ZF 166 187
ENSMUSP00000111057 C2H2 ZF 273 294
ENSMUSP00000111057 C2H2 ZF 301 323
ENSMUSP00000111057 C2H2 ZF 329 351
ENSMUSP00000111057 C2H2 ZF 357 378
ENSMUSP00000114644 C2H2 ZF 313 334
ENSMUSP00000114644 C2H2 ZF 341 363
ENSMUSP00000114644 C2H2 ZF 369 391
ENSMUSP00000114644 C2H2 ZF 397 418

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N
ASU_15182 Ascaris suum ASU_15182 N
Bm6550 Brugia malayi Bm6550 N
CBN07630 Caenorhabditis brenneri CBN07630 N
CBG05690 Caenorhabditis briggsae CBG05690 N
dmd-3 Caenorhabditis elegans WBGene00012832 D
CRE06043 Caenorhabditis remanei CRE06043 N
DME_0000028701 Dracunculus medinensis DME_0000028701 N
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N
LOAG_13296 Loa loa LOAG_13296 N
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N
WBGene00242840 Onchocerca volvulus WBGene00242840 N
PEQ_0000560001 Parascaris equorum PEQ_0000560001 N
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N
L889_g14208 Steinernema feltiae L889_g14208 N
L892_g27879 Steinernema scapterisci L892_g27879 I
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N
SMUV_0000467601 Syphacia muris SMUV_0000467601 N
SMUV_0001103601 Syphacia muris SMUV_0001103601 N
TCNE_0001625401 Toxocara canis TCNE_0001625401 N