ZBTB18 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000007968 T103028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000006879 C2H2 ZF 379 401
ENSOCUP00000006879 C2H2 ZF 420 441
ENSOCUP00000006879 C2H2 ZF 447 469
ENSOCUP00000006879 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002678 Ailuropoda melanoleuca ENSAMEG00000002678 I
ZNF777 Anolis carolinensis ENSACAG00000017661 I
ENSP00000398108-D1 Bos grunniens ENSP00000398108-D1 I
ZNF777 Bos taurus ENSBTAG00000002810 I
ZNF777 Callithrix jacchus ENSCJAG00000032232 I
ZNF777 Canis familiaris ENSCAFG00000025145 I
ZNF777 Cavia porcellus ENSCPOG00000014359 I
Cmyd_10002814 Chelonia mydas Cmyd_10002814 I
ENSCSAG00000006994 Chlorocebus sabaeus ENSCSAG00000006994 I
ZNF777 Dasypus novemcinctus ENSDNOG00000003957 I
ZNF777 Felis catus ENSFCAG00000007553 I
ZNF777 Gorilla gorilla ENSGGOG00000016445 I
ZNF777 Homo sapiens ENSG00000196453 D
ENSSTOG00000027760 Ictidomys tridecemlineatus ENSSTOG00000027760 I
ZNF777 Loxodonta africana ENSLAFG00000006716 I
ENSP00000398108 Macaca fascicularis ENSP00000398108 I
ZNF777 Macaca mulatta ENSMMUG00000002497 I
ENSMEUG00000005929 Macropus eugenii ENSMEUG00000005929 I
ZNF777 Monodelphis domestica ENSMODG00000002329 I
Zfp777 Mus musculus ENSMUSG00000071477 I
Myotis_brandtii_ZNF777_10025635 Myotis brandtii Myotis_brandtii_ZNF777_10025635 I
ZNF777 Myotis lucifugus ENSMLUG00000017103 I
ENSNLEG00000003719 Nomascus leucogenys ENSNLEG00000003719 I
ZNF777 Oryctolagus cuniculus ENSOCUG00000007975 I
ZNF777 Pan troglodytes ENSPTRG00000023754 I
Pvit_14802 Pogona vitticeps Pvit_14802 I
ENSPPYG00000018155 Pongo abelii ENSPPYG00000018155 I
ZNF777 Procavia capensis ENSPCAG00000003810 I
ZNF777 Pteropus vampyrus ENSPVAG00000010873 I
Zfp777 Rattus norvegicus ENSRNOG00000033639 I
ZNF777 Sus scrofa ENSSSCG00000016775 I
ZNF777 Tursiops truncatus ENSTTRG00000015695 I