CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SALL4
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000013799
T103554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SALL4
M08866_2.00
Homo sapiens
CMCWCCCHNN
NNDGGGWGKG
Misc
Kulakovskiy et al.(2013)
SALL4_HUMAN.H11MO.0.B
0.790
0.993
Sall4
M08979_2.00
Mus musculus
CMCWCCCHNN
NNDGGGWGKG
Misc
Kulakovskiy et al.(2013)
SALL4_MOUSE.H11MO.0.A
0.774
0.941
Sall4
M10341_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRRS_05
0.774
0.941
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000012360
C2H2 ZF
323
345
HKCKYCSKVFGTDSSLQIHLRSH
ENSOGAP00000012360
C2H2 ZF
351
373
FVCSVCGHRFTTKGNLKVHFHRH
ENSOGAP00000012360
C2H2 ZF
536
558
FQCKICGRAFSTKGNLKTHLGVH
ENSOGAP00000012360
C2H2 ZF
568
590
HSCPICQKKFTNAVLLQQHIRMH
ENSOGAP00000012360
C2H2 ZF
838
858
CTRCGKNFSSASALQIHERTH
ENSOGAP00000012360
C2H2 ZF
864
886
FVCNICGRAFTTKGNLKVHYMTH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_084580
Aspergillus clavatus
CADACLAG00007588
N
CADAFLAG00003319
Aspergillus flavus
CADAFLAG00003319
N
ANIA_06392
Aspergillus nidulans
CADANIAG00006587
N
CADANGAG00002233
Aspergillus niger
CADANGAG00002233
N
ATEG_10332
Aspergillus terreus
CADATEAG00002474
N
Pc22g12710
Penicillium chrysogenum
Pc22g12710
N
PCH_Pc22g12710
Penicillium rubens
PCH_Pc22g12710
N