ZNF580 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000032491 T103848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF580
M04637_2.00 		Homo sapiens
VCTACCCYHNVCTACCCY
RGGGTAGBNDRGGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_eDBD_HT-SELEX 		0.827 1.000
ZNF580
M04639_2.00 		Homo sapiens
VCTACCNYHNNVCTACCNH
DNGGTAGBNNDRNGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_1 		0.827 1.000
ZNF580
M04640_2.00 		Homo sapiens
BRTTATGTTAAATWRTTACCNYN
NRNGGTAAYWATTTAACATAAYV		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_2 		0.827 1.000
ZNF580
M04638_2.00 		Homo sapiens
MCTACCCTHRMCTACCCT
AGGGTAGKYDAGGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_eDBD_Methyl-HT-SELEX 		0.827 1.000
ZNF580
M04641_2.00 		Homo sapiens
MCTACCHYNNNMCTACCHH
DDGGTAGKNNNRDGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_1 		0.827 1.000
ZNF580
M04642_2.00 		Homo sapiens
NRTTATGTTAAATWRTTACCHTN
NADGGTAAYWATTTAACATAAYN		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000017176 C2H2 ZF 92 114
ENSOGAP00000017176 C2H2 ZF 120 142
ENSOGAP00000017176 C2H2 ZF 150 172

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_00710 Beauveria bassiana BBA_00710 N
BBA_01117 Beauveria bassiana BBA_01117 N
GLRG_02300 Colletotrichum graminicola GLRG_02300 N
FFUJ_03177 Fusarium fujikuroi FFUJ_03177 N
FOXG_02133 Fusarium oxysporum FOXG_02133 N
NechaG68595 Fusarium solani NechaG68595 N
FVEG_05296 Fusarium verticillioides FVEG_05296 N
CMQ_4538 Grosmannia clavigera CMQ_4538 N
estExt_Genewise1Plus.C_sca_3_chr4_2_01346 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_01346 N
SAPIO_CDS5746 Scedosporium apiospermum SAPIO_CDS5746 N
S40288_03317 Stachybotrys chartarum S40288_03317 N
S40285_01174 Stachybotrys chlorohalonata S40285_01174 N
VHEMI05268 Torrubiella hemipterigena VHEMI05268 N
TRIATDRAFT_249561 Trichoderma atroviride TRIATDRAFT_249561 N
TRIREDRAFT_104994 Trichoderma reesei TRIREDRAFT_104994 N
TRIVIDRAFT_122602 Trichoderma virens TRIVIDRAFT_122602 N
VDBG_02829 Verticillium albo atrum VDBG_02829 N
VDBG_02829 Verticillium alfalfae VDBG_02829 N
VDAG_03747 Verticillium dahliae VDAG_03747 N