CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PATZ1
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000002286
T104394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000002115
C2H2 ZF
291
313
LPCGLCGKVFTDANRLRQHEAQH
ENSOPRP00000002115
C2H2 ZF
355
376
ACDICGKIFRDVYHLNRHKLSH
ENSOPRP00000002115
C2H2 ZF
382
404
YSCPVCGLRFKRKDRMSYHVRSH
ENSOPRP00000002115
C2H2 ZF
412
435
YICQSCGKGFSRPDHLNGHIKQVH
ENSOPRP00000002115
C2H2 ZF
441
463
HKCQTCNASFATRDRLRSHLACH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g012880
Brassica oleracea
Bo4g012880
I
0.000
Bo4g112860
Brassica oleracea
Bo4g112860
N
0.000
GLYMA03G27865
Glycine max
GLYMA03G27865
I
0.000
GLYMA19G30681
Glycine max
GLYMA19G30681
I
0.000
mgf013640m
Mimulus guttatus
mgf013640m
I
0.000
POPTR_0016s03220
Populus trichocarpa
POPTR_0016s03220
I
0.000