ZNF250 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000000092 T105637_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.800 0.946
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.800 0.946
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.800 0.946
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.800 0.946
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.800 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000000084 C2H2 ZF 199 221
ENSPCAP00000000084 C2H2 ZF 227 249
ENSPCAP00000000084 C2H2 ZF 255 277
ENSPCAP00000000084 C2H2 ZF 283 305
ENSPCAP00000000084 C2H2 ZF 311 333
ENSPCAP00000000084 C2H2 ZF 339 361
ENSPCAP00000000084 C2H2 ZF 367 389
ENSPCAP00000000084 C2H2 ZF 395 417
ENSPCAP00000000084 C2H2 ZF 423 445
ENSPCAP00000000084 C2H2 ZF 451 473
ENSPCAP00000000084 C2H2 ZF 479 501
ENSPCAP00000000084 C2H2 ZF 507 529
ENSPCAP00000000084 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005726 Ailuropoda melanoleuca ENSAMEG00000005726 N
Alligator_sinensis_CCG007839.1 Alligator sinensis Alligator_sinensis_CCG007839.1 N
ENSAPLG00000015698 Anas platyrhynchos ENSAPLG00000015698 N
ZFPM2 Anolis carolinensis ENSACAG00000009858 N
Afo_R009964 Aptenodytes forsteri Afo_R009964 N
ENSP00000384179-D1 Bos grunniens ENSP00000384179-D1 N
ZFPM2 Bos taurus ENSBTAG00000001649 N
Brh_R009980 Buceros rhinoceros Brh_R009980 N
ZFPM2 Callithrix jacchus ENSCJAG00000006642 N
Aan_R003941 Calypte anna Aan_R003941 N
ZFPM2 Canis familiaris ENSCAFG00000000678 N
Cmyd_10010856 Chelonia mydas Cmyd_10010856 N
ZFPM2 Choloepus hoffmanni ENSCHOG00000010127 N
ZFPM2 Dasypus novemcinctus ENSDNOG00000045385 N
Zfpm2 Dipodomys ordii ENSDORG00000002573 N
ZFPM2 Echinops telfairi ENSETEG00000002635 N
ZFPM2 Equus caballus ENSECAG00000020172 N
ZFPM2 Erinaceus europaeus ENSEEUG00000009933 N
ZFPM2 Felis catus ENSFCAG00000009078 N
ENSFALG00000006051 Ficedula albicollis ENSFALG00000006051 N
ENSGALG00000016078 Gallus gallus ENSGALG00000016078 N
Gfo_R006037 Geospiza fortis Gfo_R006037 N
ZFPM2 Gorilla gorilla ENSGGOG00000011645 N
ZFPM2 Homo sapiens ENSG00000169946 N
ENSSTOG00000020729 Ictidomys tridecemlineatus ENSSTOG00000020729 N
ZFPM2 Loxodonta africana ENSLAFG00000010342 N
ZFPM2 Meleagris gallopavo ENSMGAG00000012374 N
ZFPM2 Microcebus murinus ENSMICG00000001099 N
ZFPM2 Monodelphis domestica ENSMODG00000005359 N
ENSMPUG00000005985 Mustela putorius furo ENSMPUG00000005985 N
Zfpm2 Mus musculus ENSMUSG00000022306 N
Myotis_brandtii_ZFPM2_10006936 Myotis brandtii Myotis_brandtii_ZFPM2_10006936 N
ZFPM2 Myotis lucifugus ENSMLUG00000010148 N
ENSNLEG00000003937 Nomascus leucogenys ENSNLEG00000003937 N
ZFPM2 Ornithorhynchus anatinus ENSOANG00000011618 N
ZFPM2 Oryctolagus cuniculus ENSOCUG00000005930 N
ZFPM2 Otolemur garnettii ENSOGAG00000027431 N
ENSOARG00000015495 Ovis aries ENSOARG00000015495 N
ENSPSIG00000004514 Pelodiscus sinensis ENSPSIG00000004514 N
ENSPPYG00000018814 Pongo abelii ENSPPYG00000018814 N
ZFPM2 Pteropus vampyrus ENSPVAG00000016508 N
Zfpm2 Rattus norvegicus ENSRNOG00000004109 N
ENSSHAG00000016982 Sarcophilus harrisii ENSSHAG00000016982 N
ZFPM2 Sus scrofa ENSSSCG00000006038 N
ZFPM2 Taeniopygia guttata ENSTGUG00000012190 N
ENSTSYG00000003772 Tarsius syrichta ENSTSYG00000003772 N
ZFPM2 Tursiops truncatus ENSTTRG00000004168 N
Tal_R002301 Tyto alba Tal_R002301 N