CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN30
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000009915
T105844_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN30
M08365_2.00
Homo sapiens
BCCWGSRGCCHBSVS
SBSVDGGCYSCWGGV
ChIP-seq
Schmitges et al.(2016)
Q86W11_1-5.RCADE
0.769
0.887
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000009201
C2H2 ZF
301
323
FKCFDCGKAFLQNSKLIRHQRSH
ENSPCAP00000009201
C2H2 ZF
329
351
YACKECGKAFSLSSDLVRHKRIH
ENSPCAP00000009201
C2H2 ZF
357
379
YKCCECGKAFRGSSELIRHRRIH
ENSPCAP00000009201
C2H2 ZF
385
406
YKCKCGKAFSRRSALIQHDRIH
ENSPCAP00000009201
C2H2 ZF
412
434
YECNQCGKAFGRSSILIEHQRIH
ENSPCAP00000009201
C2H2 ZF
440
462
YKCIECEKSFNQSSALTQHQRIH
ENSPCAP00000009201
C2H2 ZF
468
490
YECSECRKTFRHRSGLMQHHRTH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy