ZNF213 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000012311 T105904_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF213
M08284_2.00 		Homo sapiens
CKCCGCCYGVKKTCK
MGAMMBCRGGCGGMG		 ChIP-seq
Schmitges et al.(2016)
O14771_1-5.RCADE 		0.793 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000011460 C2H2 ZF 189 211
ENSPCAP00000011460 C2H2 ZF 217 239
ENSPCAP00000011460 C2H2 ZF 245 267
ENSPCAP00000011460 C2H2 ZF 273 295
ENSPCAP00000011460 C2H2 ZF 301 322

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.000
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.000
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.000
CRF1 Arabidopsis thaliana AT4G11140 I 0.000
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.000
Bo3g045150 Brassica oleracea Bo3g045150 I 0.000
PK28823.1 Cannabis sativa PK28823.1 I 0.000
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.000
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.000
Ca_03948 Cicer arietinum Ca_03948 I 0.000
Ca_08911 Cicer arietinum Ca_08911 N 0.000
Cla004291 Citrullus lanatus Cla004291 I 0.000
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I 0.000
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.000
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I 0.000
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.000
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.000
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.000
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.000
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.000
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.000
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.000
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.000
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.000
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.000
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.000
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.000
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.000
GLYMA11G31401 Glycine max GLYMA11G31401 I 0.000
GLYMA20G33840 Glycine max GLYMA20G33840 I 0.000
Gorai.009G355700 Gossypium raimondii Gorai.009G355700 I 0.000
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.000
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.000
MDP0000854039 Malus domestica MDP0000854039 I 0.000
MDP0000308379 Malus domestica MDP0000308379 I 0.000
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.000
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.000
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.000
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.000
mgf018116m Mimulus guttatus mgf018116m I 0.000
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.000
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.000
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.000
POPTR_0019s15190 Populus trichocarpa POPTR_0019s15190 I 0.000
Pm019793 Prunus mume Pm019793 I 0.000
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.000
30169.m006542 Ricinus communis 30169.m006542 I 0.000
28641.m000082 Ricinus communis 28641.m000082 I 0.000
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.000
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.000
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.000
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.000
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.000
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.000
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.000
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.000
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.000
TCM_015336 Theobroma cacao TCM_015336 I 0.000
TCM_032408 Theobroma cacao TCM_032408 I 0.000
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.000
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.000