CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000013807
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000013807
T106323_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IKZF2
M10105_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.758
0.837
IKZF2
M10106_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.758
0.837
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000013852
C2H2 ZF
108
130
LSCDICGLSCISINVLLVHKRSH
ENSPFOP00000013852
C2H2 ZF
136
158
FHCTQCGASFTQKGNLLRHIKLH
ENSPFOP00000013852
C2H2 ZF
164
186
FKCPMCSYACRRRDALSGHLRTH
ENSPFOP00000013852
C2H2 ZF
192
215
FKCNHCSRSYKQRSSLDEHRERCH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_30589
Aegilops tauschii
F775_30589
I
BRADI4G04720
Brachypodium distachyon
BRADI4G04720
I
MLOC_51930
Hordeum vulgare
MLOC_51930
I
LPERR12G12950
Leersia perrieri
LPERR12G12950
I
GSMUA_Achr11G25310_001
Musa acuminata
GSMUA_Achr11G25310_001
N
OBART12G15770
Oryza barthii
OBART12G15770
I
ORGLA12G0138000
Oryza glaberrima
ORGLA12G0138000
I
ORGLA11G0215100
Oryza glaberrima
ORGLA11G0215100
I
OGLUM12G17310
Oryza glumaepatula
OGLUM12G17310
I
BGIOSGA037592
Oryza indica
BGIOSGA037592
I
OMERI02G09390
Oryza meridionalis
OMERI02G09390
I
ONIVA12G14510
Oryza nivara
ONIVA12G14510
I
OPUNC12G14150
Oryza punctata
OPUNC12G14150
I
ORUFI12G17520
Oryza rufipogon
ORUFI12G17520
I
Pavir.Cb00560
Panicum virgatum
Pavir.Cb00560
I
Si023541m.g
Setaria italica
Si023541m.g
I
Sb08g018170
Sorghum bicolor
Sb08g018170
I
Traes_5BS_FF44610EF1
Triticum aestivum
Traes_5BS_FF44610EF1
I
Traes_5DS_011851EE7
Triticum aestivum
Traes_5DS_011851EE7
I
GRMZM2G479885
Zea mays
GRMZM2G479885
D
GRMZM2G160902
Zea mays
GRMZM2G160902
I