CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSPSIG00000012066 *(Pelodiscus sinensis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSPSIG00000012066	T107662_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PRDM4 M02881_2.00	Homo sapiens	TTTCAAGGCCCCC	GGGGGCCTTGAAA	SELEX Jolma et al.(2013) PRDM4_1	0.817	0.949
PRDM4 M04421_2.00	Homo sapiens	YRRCNGTTTCAAGKCYMCCC	GGGKRGMCTTGAAACNGYYR	SELEX Yin et al.(2017) PRDM4_eDBD_HT-SELEX	0.817	0.949
PRDM4 M04422_2.00	Homo sapiens	YRGCRGTTTCRAGGSTTVCC	GGBAASCCTYGAAACYGCYR	SELEX Yin et al.(2017) PRDM4_eDBD_Methyl-HT-SELEX_1	0.817	0.949
PRDM4 M04423_2.00	Homo sapiens	YRRCRGTTTCRAGKSYNCCC	GGGNRSMCTYGAAACYGYYR	SELEX Yin et al.(2017) PRDM4_eDBD_Methyl-HT-SELEX_2	0.817	0.949
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Pelodiscus sinensis* TFs