ZFP1 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000008354 T107888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH

DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.827 1.000
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC

GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.827 1.000
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH

DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.827 1.000
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM

KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.827 1.000
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH

DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.827 1.000
Zfp1
M10357_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.806 0.951
Zfp1
M10358_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.806 0.951
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000001021 C2H2 ZF 184 206
ENSPTRP00000001021 C2H2 ZF 212 234
ENSPTRP00000001021 C2H2 ZF 240 262
ENSPTRP00000001021 C2H2 ZF 268 290
ENSPTRP00000001021 C2H2 ZF 296 318
ENSPTRP00000001021 C2H2 ZF 324 346
ENSPTRP00000001021 C2H2 ZF 352 374
ENSPTRP00000001021 C2H2 ZF 380 402

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR01G28210 Leersia perrieri LPERR01G28210 N
OGLUM01G36910 Oryza glumaepatula OGLUM01G36910 N
BGIOSGA004540 Oryza indica BGIOSGA004540 N
BGIOSGA004544 Oryza indica BGIOSGA004544 N
OLONG_000964 Oryza longistaminata OLONG_000964 N
OMERI01G29650 Oryza meridionalis OMERI01G29650 N
ORUFI01G35930 Oryza rufipogon ORUFI01G35930 N