CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REST
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000016087
T108132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REST
M08084_2.00
Homo sapiens
GSHGCTGTCCRWGGTSCTGAH
DTCAGSACCWYGGACAGCDSC
ChIP-seq
Mathelier et al.(2014)
MA0138.2
0.827
1.000
REST
M07846_2.00
Homo sapiens
TCCVHGGTGCTGAM
KTCAGCACCDBGGA
ChIP-seq
Gerstein et al.(2012)
GM12878_NRSF_HudsonAlpha
0.827
1.000
REST
M07847_2.00
Homo sapiens
GCTGTCCRHGGTGCT
AGCACCDYGGACAGC
ChIP-seq
Gerstein et al.(2012)
H1-hESC_NRSF_HudsonAlpha
0.827
1.000
REST
M07848_2.00
Homo sapiens
HGCTGTCCRWGGTSCT
AGSACCWYGGACAGCD
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_NRSF_HudsonAlpha
0.827
1.000
REST
M07849_2.00
Homo sapiens
TGTCCRHGGTGCTGA
TCAGCACCDYGGACA
ChIP-seq
Gerstein et al.(2012)
HepG2_NRSF_HudsonAlpha
0.827
1.000
REST
M07850_2.00
Homo sapiens
TGTCCVHGGTGCTGA
TCAGCACCDBGGACA
ChIP-seq
Gerstein et al.(2012)
HTB-11_NRSF_HudsonAlpha
0.827
1.000
REST
M07851_2.00
Homo sapiens
CTGTCCVHGGTGCTGA
TCAGCACCDBGGACAG
ChIP-seq
Gerstein et al.(2012)
K562_NRSF_HudsonAlpha
0.827
1.000
REST
M07852_2.00
Homo sapiens
GSHGCTGTCCRHGGTGCTGAM
KTCAGCACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
PANC-1_NRSF_HudsonAlpha
0.827
1.000
REST
M07853_2.00
Homo sapiens
CTGTCCRHGGTGCTG
CAGCACCDYGGACAG
ChIP-seq
Gerstein et al.(2012)
PFSK-1_NRSF_HudsonAlpha
0.827
1.000
REST
M07854_2.00
Homo sapiens
GSHGCTGTCCRHGGT
ACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
U87_NRSF_HudsonAlpha
0.827
1.000
REST
M08861_2.00
Homo sapiens
DGSHGCTGTCCRHGGTGCTGAH
DTCAGCACCDYGGACAGCDSCH
Misc
Kulakovskiy et al.(2013)
REST_HUMAN.H11MO.0.A
0.827
1.000
REST
M09501_2.00
Homo sapiens
GGHGCTGTCCRWGGTGCTGA
TCAGCACCWYGGACAGCDCC
Misc
Heinz et al.(2010)
Jurkat-NRSF
0.827
1.000
REST
M10116_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSE_B
0.827
1.000
REST
M10117_2.00
Homo sapiens
GSYKCTGTCCGYGGTGCTGAA
TTCAGCACCRCGGACAGMRSC
Transfac
Matys et al.(2006)
V$NRSF_01
0.827
1.000
REST
M10118_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_01
0.827
1.000
REST
M10119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_04
0.827
1.000
REST
M10120_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_05
0.827
1.000
REST
M10121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_06
0.827
1.000
REST
M10122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_10
0.827
1.000
REST
M10123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_12
0.827
1.000
REST
M10124_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_Q5
0.827
1.000
Rest
M10362_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSF_Q4
0.826
0.988
Rest
M08983_2.00
Mus musculus
DGBHGCTGTCCDHGGTSCTGRH
DYCAGSACCDHGGACAGCDVCH
Misc
Kulakovskiy et al.(2013)
REST_MOUSE.H11MO.0.A
0.820
0.981
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000039730
C2H2 ZF
216
238
IRCDRCGYNTNRYDHYTAHLKHH
ENSPTRP00000039730
C2H2 ZF
248
270
YKCIICTYTTVSEYHWRKHLRNH
ENSPTRP00000039730
C2H2 ZF
276
298
YTCGKCNYFSDRKNNYVQHVRTH
ENSPTRP00000039730
C2H2 ZF
304
326
YKCELCPYSSSQKTHLTRHMRTH
ENSPTRP00000039730
C2H2 ZF
332
355
FKCDQCSYVASNQHEVTRHARQVH
ENSPTRP00000039730
C2H2 ZF
361
383
LNCPHCDYKTADRSNFKKHVELH
ENSPTRP00000039730
C2H2 ZF
389
412
FNCPVCDYAASKKCNLQYHFKSKH
ENSPTRP00000057802
C2H2 ZF
216
238
IRCDRCGYNTNRYDHYTAHLKHH
ENSPTRP00000057802
C2H2 ZF
248
270
YKCIICTYTTVSEYHWRKHLRNH
ENSPTRP00000057802
C2H2 ZF
276
298
YTCGKCNYFSDRKNNYVQHVRTH
ENSPTRP00000057802
C2H2 ZF
309
332
FKCDQCSYVASNQHEVTRHARQVH
ENSPTRP00000057802
C2H2 ZF
338
360
LNCPHCDYKTADRSNFKKHVELH
ENSPTRP00000057802
C2H2 ZF
366
389
FNCPVCDYAASKKCNLQYHFKSKH
ENSPTRP00000060323
C2H2 ZF
159
181
FRCKPCQYEAESEEQFVHHIRVH
ENSPTRP00000060323
C2H2 ZF
216
238
IRCDRCGYNTNRYDHYTAHLKHH
ENSPTRP00000060323
C2H2 ZF
248
270
YKCIICTYTTVSEYHWRKHLRNH
ENSPTRP00000060323
C2H2 ZF
276
298
YTCGKCNYFSDRKNNYVQHVRTH
ENSPTRP00000060323
C2H2 ZF
304
326
YKCELCPYSSSQKTHLTRHMRTH
ENSPTRP00000060323
C2H2 ZF
332
355
FKCDQCSYVASNQHEVTRHARQVH
ENSPTRP00000060323
C2H2 ZF
361
383
LNCPHCDYKTADRSNFKKHVELH
ENSPTRP00000060323
C2H2 ZF
389
412
FNCPVCDYAASKKCNLQYHFKSKH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB10568.1
Alternaria brassicicola
AB10568.1
I
AB04090.1
Alternaria brassicicola
AB04090.1
I
AOL_s00076g701
Arthrobotrys oligospora
AOL_s00076g701
I
ARB_07827
Arthroderma benhamiae
ARB_07827
I
MCYG_01012
Arthroderma otae
MCYG_01012
I
fgenesh1_pg.00866_#_462
Aspergillus carbonarius
fgenesh1_pg.00866_#_462
I
ACLA_039850
Aspergillus clavatus
CADACLAG00003794
I
CADAFLAG00002433
Aspergillus flavus
CADAFLAG00002433
I
AFUA_3G11970
Aspergillus fumigatus
CADAFUAG00005110
I
ANIA_02855
Aspergillus nidulans
CADANIAG00010235
I
CADANGAG00002305
Aspergillus niger
CADANGAG00002305
I
CADAORAG00001352
Aspergillus oryzae
CADAORAG00001352
I
EURHEDRAFT_457463
Aspergillus ruber
EURHEDRAFT_457463
I
AUEXF2481DRAFT_70429
Aureobasidium subglaciale
AUEXF2481DRAFT_70429
I
BAUCODRAFT_135551
Baudoinia compniacensis
BAUCODRAFT_135551
I
COCC4DRAFT_68984
Bipolaris maydis
COCC4DRAFT_68984
I
COCMIDRAFT_86168
Bipolaris oryzae
COCMIDRAFT_86168
I
COCSADRAFT_184320
Bipolaris sorokiniana
COCSADRAFT_184320
I
COCVIDRAFT_28133
Bipolaris victoriae
COCVIDRAFT_28133
I
COCCADRAFT_5408
Bipolaris zeicola
COCCADRAFT_5408
I
BDDG_07520
Blastomyces dermatitidis
BDDG_07520
I
BGHDH14_bgh01021
Blumeria graminis
BGHDH14_bgh01021
I
CaO19.7247
Candida albicans
CaO19.7247
I
orf19.7247
Candida albicans
orf19.7247
D
CD36_13310
Candida dubliniensis
CD36_13310
I
CLUG_01736
Candida lusitaniae
CLUG_01736
I
CLUG_01736
Clavispora lusitaniae
CLUG_01736
I
CIMG_03725
Coccidioides immitis
CIMG_03725
I
CPC735_005640
Coccidioides posadasii
CPC735_005640
I
estExt_Genewise1Plus.C_11603
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_11603
I
DACRYDRAFT_55334
Dacryopinax sp
DACRYDRAFT_55334
I
H072_3224
Dactylellina haptotyla
H072_3224
I
EPUS_09090
Endocarpon pusillum
EPUS_09090
I
PV10_09015
Exophiala mesophila
PV10_09015
I
PV05_10934
Exophiala xenobiotica
PV05_10934
I
M7I_4960
Glarea lozoyensis
M7I_4960
I
CMQ_7385
Grosmannia clavigera
CMQ_7385
I
HCBG_07376
Histoplasma capsulatum
HCBG_07376
I
KUCA_T00000054001
Kuraishia capsulata
KUCA_T00000054001
N
LEMA_P072550.1
Leptosphaeria maculans
LEMA_P072550.1
I
MPH_05702
Macrophomina phaseolina
MPH_05702
I
MBM_08802
Marssonina brunnea
MBM_08802
I
MCYG_01012
Microsporum canis
MCYG_01012
I
MGYG_00974
Microsporum gypseum
MGYG_00974
I
estExt_Genewise1Plus.C_11296
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_11296
I
e_gw1.4.120.1
Mycosphaerella graminicola
e_gw1.4.120.1
I
OIDMADRAFT_49510
Oidiodendron maius
OIDMADRAFT_49510
I
F503_05381
Ophiostoma piceae uamh
F503_05381
I
PABG_11557
Paracoccidioides brasiliensis
PABG_11557
I
PAAG_07204
Paracoccidioides sp lutzii
PAAG_07204
I
Pc18g00420
Penicillium chrysogenum
Pc18g00420
I
PDIP_75300
Penicillium digitatum
PDIP_75300
I
PEX1_059590
Penicillium expansum
PEX1_059590
I
PITC_013310
Penicillium italicum
PITC_013310
I
PMAA_023920
Penicillium marneffei
PMAA_023920
I
PDE_05163
Penicillium oxalicum
PDE_05163
I
PCH_Pc18g00420
Penicillium rubens
PCH_Pc18g00420
I
U727_0043393201
Penicillium solitum
U727_0043393201
I
SNOG_11739
Phaeosphaeria nodorum
SNOG_11739
I
gww2.13.348.1
Phanerochaete chrysosporium
gww2.13.348.1
I
PHLGIDRAFT_44970
Phlebiopsis gigantea
PHLGIDRAFT_44970
I
gw1.13.295.1
Phycomyces blakesleeanus
gw1.13.295.1
I
POSPLDRAFT_43009
Postia placenta
POSPLDRAFT_43009
I
V499_08665
Pseudogymnoascus pannorum
V499_08665
I
PTT_14738
Pyrenophora teres
PTT_14738
I
PTRG_00091
Pyrenophora triticirepentis
PTRG_00091
I
RO3G_02095
Rhizopus oryzae
RO3G_02095
I
RO3G_01462
Rhizopus oryzae
RO3G_01462
I
SAPIO_CDS0213
Scedosporium apiospermum
SAPIO_CDS0213
I
SBOR_2712
Sclerotinia borealis
SBOR_2712
I
M408DRAFT_49948
Serendipita vermifera
M408DRAFT_49948
I
SETTUDRAFT_167089
Setosphaeria turcica
SETTUDRAFT_167089
I
SEPMUDRAFT_145881
Sphaerulina musiva
SEPMUDRAFT_145881
I
SNOG_11739
Stagonospora nodorum
SNOG_11739
I
PMAA_023920
Talaromyces marneffei
PMAA_023920
I
TSTA_032350
Talaromyces stipitatus
TSTA_032350
I
VHEMI02022
Torrubiella hemipterigena
VHEMI02022
I
TEQG_01042
Trichophyton equinum
TEQG_01042
I
H101_07360
Trichophyton interdigitale
H101_07360
I
H102_08253
Trichophyton rubrum
H102_08253
I
H105_08281
Trichophyton soudanense
H105_08281
I
TESG_04572
Trichophyton tonsurans
TESG_04572
I
M407DRAFT_17900
Tulasnella calospora
M407DRAFT_17900
I
M407DRAFT_84761
Tulasnella calospora
M407DRAFT_84761
I
UREG_07541
Uncinocarpus reesii
UREG_07541
I
WALSEDRAFT_15215
Wallemia sebi
WALSEDRAFT_15215
N
Mycgr3G40797
Zymoseptoria tritici
Mycgr3G40797
I