CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPTRG00000028866
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000028866
T108332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF587
M07746_2.00
Homo sapiens
HDNNTDGCGCCCAACRYKGKNNNN
NNNNMCMRYGTTGGGCGCHANNHD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF587.RCADE.ReprocessedData
0.822
0.975
ZNF417
M07639_2.00
Homo sapiens
BTGGCGCCMANHVHBKBNBNN
NNVNVMVDBDNTKGGCGCCAV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF417.RCADE.OriginalMapping
0.774
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000048462
C2H2 ZF
242
264
YVCSDCGKSFSRYVSFSNHQRDH
ENSPTRP00000048462
C2H2 ZF
270
292
YDCGECGKSYSRKSSLIQHQRVH
ENSPTRP00000048462
C2H2 ZF
298
320
YPCGECGKSFSQKGSLISHQRVH
ENSPTRP00000048462
C2H2 ZF
325
348
PYECGEYGKSFGQKGNLIQHQRGH
ENSPTRP00000048462
C2H2 ZF
354
376
YHCGECGKSFRQKFCLINHQRVH
ENSPTRP00000048462
C2H2 ZF
382
404
YKCGECGKSFGQKGNLVHHQRGH
ENSPTRP00000048462
C2H2 ZF
410
432
YECKECGKSFRYRSHLTEHQRLH
ENSPTRP00000048462
C2H2 ZF
438
460
YNCRECGKLFNRKYHLLVHERVH
ENSPTRP00000048462
C2H2 ZF
466
488
YACEVCGKLFGNKHSVTIHQRIH
ENSPTRP00000048462
C2H2 ZF
494
516
YECSECGKSFLSSSALHVHKRVH
ENSPTRP00000048462
C2H2 ZF
522
544
YKCSECGKSFAECSSLIKHRRIH
ENSPTRP00000048462
C2H2 ZF
550
572
YECTKCGKTFQRSSTLLHHQSSH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF418
Gorilla gorilla
ENSGGOG00000006371
I
0.775
ZNF417
Homo sapiens
ENSG00000173480
D
0.774
ZNF587
Homo sapiens
ENSG00000198466
D
0.822
ENSNLEG00000011019
Nomascus leucogenys
ENSNLEG00000011019
I
0.806
ENSNLEG00000011035
Nomascus leucogenys
ENSNLEG00000011035
I
0.768
ENSPANG00000008962
Papio anubis
ENSPANG00000008962
I
0.767