ZFP42 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000031054 T108361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP42
M04581_2.00 		Homo sapiens
NGDCVGCCATMTTGN
NCAAKATGGCBGHCN		 SELEX
Yin et al.(2017)
ZFP42_eDBD_HT-SELEX 		0.815 0.989
ZFP42
M08348_2.00 		Homo sapiens
GSMGCCATYTTN
NAARATGGCKSC		 ChIP-seq
Schmitges et al.(2016)
Q96MM3_1-4.RCADE 		0.815 0.989
ZFP42
M08927_2.00 		Homo sapiens
VGSMGCCATYTT
AARATGGCKSCB		 Misc
Kulakovskiy et al.(2013)
ZFP42_HUMAN.H11MO.0.A 		0.815 0.989
ZFP42
M10278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REX1_03 		0.815 0.989
ZFP42
M04582_2.00 		Homo sapiens
NGGCRGCCATMTTGN
NCAAKATGGCYGCCN		 SELEX
Yin et al.(2017)
ZFP42_eDBD_Methyl-HT-SELEX 		0.815 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000053256 C2H2 ZF 188 212
ENSPTRP00000053256 C2H2 ZF 217 239
ENSPTRP00000053256 C2H2 ZF 245 269
ENSPTRP00000053256 C2H2 ZF 275 299

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L898_g448 Steinernema monticolum L898_g448 N