CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF79
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000000923
T108434_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF79
M07697_2.00
Homo sapiens
TTAGANATTHWTTYBTTT
AAAVRAAWDAATNTCTAA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF79.RCADE.ReprocessedData
0.793
0.945
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000000874
C2H2 ZF
192
214
YMCNECGKAFSYCSSLSQHQKSH
ENSPVAP00000000874
C2H2 ZF
220
242
YECSECGKAFSQSSSLIQHQRVH
ENSPVAP00000000874
C2H2 ZF
248
270
YKCSQCGRAFSQNANLTKHQRTH
ENSPVAP00000000874
C2H2 ZF
276
298
YKCMECEKAFSDCSALVQHQRIH
ENSPVAP00000000874
C2H2 ZF
304
326
YECSECGKAFRHSANLTNHQRTH
ENSPVAP00000000874
C2H2 ZF
332
354
YECSACGKAFSYCAAFIQHQRIH
ENSPVAP00000000874
C2H2 ZF
360
382
YKCNTCGKAFSQSANLTNHQRTH
ENSPVAP00000000874
C2H2 ZF
388
410
YKCSECGKAFSQSTNLIIHQKTH
ENSPVAP00000000874
C2H2 ZF
416
438
YKCNECGKFFSESSALIRHHIIH
ENSPVAP00000000874
C2H2 ZF
444
466
YECNECGKAFNQSSSLSQHQRIH
ENSPVAP00000000874
C2H2 ZF
472
494
YQCSQCGKAFRCSSAFIRHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
genemark-nMf.1.1.scaf23980-processed-gene-0.0
Meloidogyne floridensis
genemark-nMf.1.1.scaf23980-processed-gene-0.0
N
maker-nMf.1.1.scaf02419-snap-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf02419-snap-gene-0.13
N
maker-nMf.1.1.scaf34433-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf34433-augustus-gene-0.3
N
Minc05626
Meloidogyne incognita
Minc05626
N
Minc15867
Meloidogyne incognita
Minc15867
N
Minc17474
Meloidogyne incognita
Minc17474
N
Minc17760
Meloidogyne incognita
Minc17760
N
Minc18206
Meloidogyne incognita
Minc18206
N
Minc18477
Meloidogyne incognita
Minc18477
N
Minc18532
Meloidogyne incognita
Minc18532
N