Zfp410 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000010985 T108962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp410
M00140_2.00 		Mus musculus
CYATCCCA
TGGGATRG		 PBM
Badis et al.(2009)
Zfp410_3034 		0.827 1.000
ZNF410
M02882_2.00 		Homo sapiens
KVNTATTATGGGATGKN
NMCATCCCATAATANBM		 SELEX
Jolma et al.(2013)
ZNF410_1 		0.827 1.000
ZNF410
M04435_2.00 		Homo sapiens
NTATTATGGGNTRB
VYANCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_HT-SELEX 		0.827 1.000
ZNF410
M04436_2.00 		Homo sapiens
NTATTATGGGHTRB
VYADCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000014738 C2H2 ZF 219 243
ENSRNOP00000014738 C2H2 ZF 249 273
ENSRNOP00000014738 C2H2 ZF 279 303
ENSRNOP00000014738 C2H2 ZF 309 333
ENSRNOP00000014738 C2H2 ZF 339 362

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_ACL096W Ashbya gossypii AGOS_ACL096W N
Ecym_3392 Eremothecium cymbalariae Ecym_3392 N
KLLA0_E18129g Kluyveromyces lactis KLLA0_E18129g N
SAKL0G19470g Lachancea kluyveri SAKL0G19470g N
AACERI_AaceriACL096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL096W N
TDEL_0B07490 Torulaspora delbrueckii TDEL_0B07490 N
ZBAI_04035 Zygosaccharomyces bailii ZBAI_04035 N
ZBAI_09838 Zygosaccharomyces bailii ZBAI_09838 N
ZYRO0E00572g Zygosaccharomyces rouxii ZYRO0E00572g N