Mecom (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012645 T108974_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.827 1.000
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.827 1.000
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.822 0.982
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.822 0.982
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.822 0.982
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.822 0.982
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.822 0.982
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.822 0.982
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.822 0.982
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.822 0.982
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.822 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000060380 C2H2 ZF 21 42
ENSRNOP00000060380 C2H2 ZF 76 97
ENSRNOP00000060380 C2H2 ZF 103 125
ENSRNOP00000060380 C2H2 ZF 131 154
ENSRNOP00000060380 C2H2 ZF 160 182
ENSRNOP00000060380 C2H2 ZF 188 210
ENSRNOP00000060380 C2H2 ZF 217 238
ENSRNOP00000060380 C2H2 ZF 733 755
ENSRNOP00000060380 C2H2 ZF 761 784
ENSRNOP00000060380 C2H2 ZF 790 812

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_170182 Amanita muscaria M378DRAFT_170182 N
CERSUDRAFT_88317 Ceriporiopsis subvermispora CERSUDRAFT_88317 N
CC1G_07693 Coprinopsis cinerea CC1G_07693 N
DICSQDRAFT_174574 Dichomitus squalens DICSQDRAFT_174574 N
FIBRA_08064 Fibroporia radiculosa FIBRA_08064 N
FOMPIDRAFT_152036 Fomitopsis pinicola FOMPIDRAFT_152036 N
M413DRAFT_440277 Hebeloma cylindrosporum M413DRAFT_440277 N
estExt_fgenesh3_kg.C_120059 Heterobasidion annosum estExt_fgenesh3_kg.C_120059 N
HETIRDRAFT_411134 Heterobasidion irregulare HETIRDRAFT_411134 N
HYDPIDRAFT_115073 Hydnomerulius pinastri HYDPIDRAFT_115073 N
JAAARDRAFT_34133 Jaapia argillacea JAAARDRAFT_34133 N
PAXINDRAFT_22214 Paxillus involutus PAXINDRAFT_22214 N
PAXRUDRAFT_145041 Paxillus rubicundulus PAXRUDRAFT_145041 N
PHACADRAFT_251386 Phanerochaete carnosa PHACADRAFT_251386 N
fgenesh1_pg.C_scaffold_7000466 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000466 N
PILCRDRAFT_810626 Piloderma croceum PILCRDRAFT_810626 N
PISMIDRAFT_681565 Pisolithus microcarpus PISMIDRAFT_681565 N
PLEOSDRAFT_1110931 Pleurotus ostreatus PLEOSDRAFT_1110931 N
POSPLDRAFT_92468 Postia placenta POSPLDRAFT_92468 N
SCHCODRAFT_112222 Schizophyllum commune SCHCODRAFT_112222 N
SCHCODRAFT_232448 Schizophyllum commune SCHCODRAFT_232448 N
SERLA73DRAFT_175691 Serpula lacrymans SERLA73DRAFT_175691 N
CY34DRAFT_76552 Suillus luteus CY34DRAFT_76552 N
BN946_scf184844.g88 Trametes cinnabarina BN946_scf184844.g88 N
M407DRAFT_110022 Tulasnella calospora M407DRAFT_110022 N