CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LOC100909657
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000014552
T109000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000066855
C2H2 ZF
6
28
YKCDKCGKGFTRSSSLLVHHSVH
ENSRNOP00000066855
C2H2 ZF
34
56
FKCDRCGKGFSQSSKLHIHQRVH
ENSRNOP00000066855
C2H2 ZF
62
84
YECEECGMSFSQRSNLHIHQRVH
ENSRNOP00000066855
C2H2 ZF
90
112
YKCGECGKGFSQSSNLHIHRCTH
ENSRNOP00000066855
C2H2 ZF
118
140
YQCYECGKGFSQSSDLRIHLRVH
ENSRNOP00000066855
C2H2 ZF
146
168
YHCGKCGKGFSQSSKLLIHQRVH
ENSRNOP00000066855
C2H2 ZF
174
196
YECSRCGKGFSQSSNLHIHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold406-EXSNAP2012.18
Pristionchus exspectatus
scaffold406-EXSNAP2012.18
N