Zfp90 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000020087 T109079_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP90
M07672_2.00 		Homo sapiens
CYTTAGCTGYRT
AYRCAGCTAARG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP90.RCADE.OriginalMapping 		0.794 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000027209 C2H2 ZF 209 231
ENSRNOP00000027209 C2H2 ZF 251 273
ENSRNOP00000027209 C2H2 ZF 279 301
ENSRNOP00000027209 C2H2 ZF 307 329
ENSRNOP00000027209 C2H2 ZF 335 357
ENSRNOP00000027209 C2H2 ZF 363 385
ENSRNOP00000027209 C2H2 ZF 391 413
ENSRNOP00000027209 C2H2 ZF 447 469
ENSRNOP00000027209 C2H2 ZF 494 516
ENSRNOP00000027209 C2H2 ZF 522 544
ENSRNOP00000027209 C2H2 ZF 550 572
ENSRNOP00000027209 C2H2 ZF 578 600
ENSRNOP00000027209 C2H2 ZF 606 628
ENSRNOP00000075443 C2H2 ZF 157 179
ENSRNOP00000075443 C2H2 ZF 199 221
ENSRNOP00000075443 C2H2 ZF 227 249
ENSRNOP00000075443 C2H2 ZF 255 277
ENSRNOP00000075443 C2H2 ZF 283 305
ENSRNOP00000075443 C2H2 ZF 311 333
ENSRNOP00000075443 C2H2 ZF 339 361
ENSRNOP00000075443 C2H2 ZF 395 417
ENSRNOP00000075443 C2H2 ZF 442 464
ENSRNOP00000075443 C2H2 ZF 470 492
ENSRNOP00000075443 C2H2 ZF 498 520
ENSRNOP00000075443 C2H2 ZF 526 548
ENSRNOP00000075443 C2H2 ZF 554 576

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31862 Aegilops tauschii F775_31862 N
evm.TU.supercontig_2067.2 Carica papaya evm.TU.supercontig_2067.2 N
evm.TU.supercontig_6.10 Carica papaya evm.TU.supercontig_6.10 N
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
PGSC0003DMG400039707 Solanum tuberosum PGSC0003DMG400039707 N
TRIUR3_24442 Triticum urartu TRIUR3_24442 N