CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Znf354b
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000029678
T109166_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.776
0.943
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000004902
C2H2 ZF
145
167
FKCSTCEKAFIHSSSLRKHLKNH
ENSRNOP00000004902
C2H2 ZF
173
195
FQCKDCLKAFSQSSALIQHQRTH
ENSRNOP00000004902
C2H2 ZF
201
223
YICNECGKAFSHSASLCKHLRTH
ENSRNOP00000004902
C2H2 ZF
229
251
YTCKECGKSFSRRSSLFLHQKIH
ENSRNOP00000004902
C2H2 ZF
282
304
YLCNECGNTFKSSSSLRYHQRIH
ENSRNOP00000004902
C2H2 ZF
310
332
FRCSECGRAFSQSASLIQHERIH
ENSRNOP00000004902
C2H2 ZF
338
360
YRCGECGKGFTSISRLNRHRIIH
ENSRNOP00000004902
C2H2 ZF
366
388
YNCNECGKALSSHSTLIIHERIH
ENSRNOP00000004902
C2H2 ZF
394
416
CKCKVCGKAFRQSSALIQHQRMH
ENSRNOP00000004902
C2H2 ZF
422
444
YKCNECGKTFRCNSSLSNHQRIH
ENSRNOP00000004902
C2H2 ZF
450
472
YQCIECGMSFGQSAALIQHQRIH
ENSRNOP00000004902
C2H2 ZF
478
500
FKCNTCGRSFRQSSSLIAHQRIH
ENSRNOP00000004902
C2H2 ZF
506
528
YECSACGKLFSQRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000009090
Ailuropoda melanoleuca
ENSAMEG00000009090
I
0.769
ENSP00000304268-D38
Bos grunniens
ENSP00000304268-D38
I
0.763
ZNF354B
Bos taurus
ENSBTAG00000017123
I
0.763
ZNF354B
Callithrix jacchus
ENSCJAG00000018848
I
0.775
ZNF354B
Canis familiaris
ENSCAFG00000029114
I
0.769
ZNF354B
Cavia porcellus
ENSCPOG00000002227
I
0.770
ENSCSAG00000008583
Chlorocebus sabaeus
ENSCSAG00000008583
I
0.772
ZNF354B
Dasypus novemcinctus
ENSDNOG00000031129
I
0.770
ZNF354B
Equus caballus
ENSECAG00000012028
I
0.767
ZNF354B
Felis catus
ENSFCAG00000022066
I
0.768
ZNF354B
Gorilla gorilla
ENSGGOG00000000628
I
0.776
ZNF354B
Homo sapiens
ENSG00000178338
D
0.776
ENSSTOG00000008858
Ictidomys tridecemlineatus
ENSSTOG00000008858
I
0.759
ENSP00000327143
Macaca fascicularis
ENSP00000327143
I
0.769
ZNF354B
Macaca mulatta
ENSMMUG00000008976
I
0.769
ENSMPUG00000000728
Mustela putorius furo
ENSMPUG00000000728
I
0.769
Zfp354b
Mus musculus
ENSMUSG00000020335
I
0.793
ENSNLEG00000001411
Nomascus leucogenys
ENSNLEG00000001411
I
0.769
ENSOCUG00000029238
Oryctolagus cuniculus
ENSOCUG00000029238
I
0.768
ZNF354B
Otolemur garnettii
ENSOGAG00000027501
I
0.778
ENSOARG00000006935
Ovis aries
ENSOARG00000006935
I
0.763
ZNF354B
Pan troglodytes
ENSPTRG00000017609
I
0.776
ENSPANG00000013252
Papio anubis
ENSPANG00000013252
I
0.768
ENSPPYG00000016113
Pongo abelii
ENSPPYG00000016113
I
0.773
ZNF354B
Pteropus vampyrus
ENSPVAG00000007675
I
0.763
ZNF354B
Tursiops truncatus
ENSTTRG00000015932
I
0.773