CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000010956
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000010956
T110020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.811
0.986
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.811
0.971
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.811
0.971
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.811
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000012803
C2H2 ZF
247
269
HRCPTCNKSFSRLENLKIHNRSH
ENSSHAP00000012803
C2H2 ZF
275
299
YICPYEGCNKRYSNSSDRFKHTRTH
ENSSHAP00000012803
C2H2 ZF
305
329
YYCKMPGCHKRYTDPSSLRKHIKAH
ENSSHAP00000012804
C2H2 ZF
235
257
HRCPTCNKSFSRLENLKIHNRSH
ENSSHAP00000012804
C2H2 ZF
263
287
YICPYEGCNKRYSNSSDRFKHTRTH
ENSSHAP00000012804
C2H2 ZF
293
317
YYCKMPGCHKRYTDPSSLRKHIKAH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG21684
Drosophila erecta
FBgn0113862
N
ham
Drosophila melanogaster
FBgn0045852
N
GA25755
Drosophila pseudoobscura
FBgn0247132
N
GM17063
Drosophila sechellia
FBgn0171975
N
GK15535
Drosophila willistoni
FBgn0217540
N