ENSSHAG00000015330 (Sarcophilus harrisii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSHAG00000015330 T110089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF384
M04451_2.00 		Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA		 SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX 		0.804 0.957
ZNF384
M08306_2.00 		Homo sapiens
CTTTTTTTT
AAAAAAAAG		 ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE 		0.804 0.957
ZNF384
M08090_2.00 		Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW		 ChIP-seq
Mathelier et al.(2014)
MA1125.1 		0.804 0.957
ZNF384
M08888_2.00 		Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV		 Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C 		0.804 0.957
ZNF384
M10209_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CIZ_01 		0.804 0.957
ZNF384
M04452_2.00 		Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM		 SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX 		0.804 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000018055 C2H2 ZF 235 257
ENSSHAP00000018055 C2H2 ZF 263 285
ENSSHAP00000018055 C2H2 ZF 291 313
ENSSHAP00000018055 C2H2 ZF 324 346
ENSSHAP00000018055 C2H2 ZF 352 374
ENSSHAP00000018055 C2H2 ZF 380 404
ENSSHAP00000018055 C2H2 ZF 410 432
ENSSHAP00000018055 C2H2 ZF 440 462
ENSSHAP00000018056 C2H2 ZF 215 237
ENSSHAP00000018056 C2H2 ZF 243 265
ENSSHAP00000018056 C2H2 ZF 271 293
ENSSHAP00000018056 C2H2 ZF 299 323
ENSSHAP00000018056 C2H2 ZF 329 351
ENSSHAP00000018056 C2H2 ZF 359 381

Links

Other C2H2 ZF family TFs
Other Sarcophilus harrisii TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.000
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I 0.000
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.000
anac075 Arabidopsis thaliana AT4G29230 D 0.000
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.000
BRADI2G46197 Brachypodium distachyon BRADI2G46197 I 0.000
Bo1g016630 Brassica oleracea Bo1g016630 I 0.000
Bo7g113660 Brassica oleracea Bo7g113660 I 0.000
Bra011090 Brassica rapa Bra011090 I 0.000
Bra024152 Brassica rapa Bra024152 I 0.000
PK28347.1 Cannabis sativa PK28347.1 I 0.000
PK27085.1 Cannabis sativa PK27085.1 D 0.000
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.000
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.000
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.000
Ca_05913 Cicer arietinum Ca_05913 I 0.000
Cla017075 Citrullus lanatus Cla017075 I 0.000
Cla011431 Citrullus lanatus Cla011431 I 0.000
Cla000384 Citrullus lanatus Cla000384 N 0.000
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I 0.000
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.000
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I 0.000
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.000
Cucsa.087480 Cucumis sativus Cucsa.087480 N 0.000
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.000
Cucsa.116800 Cucumis sativus Cucsa.116800 I 0.000
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.000
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.000
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.000
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.000
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.000
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.000
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.000
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.000
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.000
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.000
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.000
LPERR05G21400 Leersia perrieri LPERR05G21400 I 0.000
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.000
Lus10012927.g Linum usitatissimum Lus10012927.g N 0.000
Lus10034999.g Linum usitatissimum Lus10034999.g N 0.000
MDP0000309351 Malus domestica MDP0000309351 I 0.000
MDP0000276278 Malus domestica MDP0000276278 I 0.000
MDP0000124509 Malus domestica MDP0000124509 I 0.000
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.000
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.000
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.000
MTR_8g102240 Medicago truncatula MTR_8g102240 I 0.000
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.000
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.000
mgf019352m Mimulus guttatus mgf019352m N 0.000
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.000
OBART05G25770 Oryza barthii OBART05G25770 I 0.000
OBART01G05840 Oryza barthii OBART01G05840 I 0.000
OB06G26080 Oryza brachyantha OB06G26080 N 0.000
OB05G33280 Oryza brachyantha OB05G33280 I 0.000
OB01G15780 Oryza brachyantha OB01G15780 I 0.000
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.000
ORGLA05G0222500 Oryza glaberrima ORGLA05G0222500 I 0.000
OGLUM05G27400 Oryza glumaepatula OGLUM05G27400 I 0.000
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.000
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.000
BGIOSGA020356 Oryza indica BGIOSGA020356 I 0.000
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.000
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.000
ONIVA05G27670 Oryza nivara ONIVA05G27670 I 0.000
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.000
OPUNC05G23360 Oryza punctata OPUNC05G23360 I 0.000
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.000
ORUFI05G27670 Oryza rufipogon ORUFI05G27670 I 0.000
OS01G0191300 Oryza sativa OS01G0191300 I 0.000
OS05G0563000 Oryza sativa OS05G0563000 I 0.000
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.000
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.000
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.000
Pm027280 Prunus mume Pm027280 I 0.000
Pm010104 Prunus mume Pm010104 I 0.000
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.000
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.000
29912.m005354 Ricinus communis 29912.m005354 I 0.000
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.000
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.000
Si002301m.g Setaria italica Si002301m.g I 0.000
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.000
TCM_029798 Theobroma cacao TCM_029798 I 0.000
TCM_037747 Theobroma cacao TCM_037747 I 0.000
Traes_3AL_41AC2099E1 Triticum aestivum Traes_3AL_41AC2099E1 I 0.000
Traes_3AL_41AC2099E Triticum aestivum Traes_3AL_41AC2099E I 0.000
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.000
Traes_3DL_C686CE2E3 Triticum aestivum Traes_3DL_C686CE2E3 I 0.000
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.000
TRIUR3_33147 Triticum urartu TRIUR3_33147 I 0.000
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.000