ENSSSCG00000006960 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000006960 T110278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI4
M08394_2.00 		Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA		 ChIP-seq
Schmitges et al.(2016)
P10075.MEME 		0.800 0.944
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000007422 C2H2 ZF 194 216
ENSSSCP00000007422 C2H2 ZF 222 244
ENSSSCP00000007422 C2H2 ZF 250 272
ENSSSCP00000007422 C2H2 ZF 278 300
ENSSSCP00000007422 C2H2 ZF 306 328
ENSSSCP00000007422 C2H2 ZF 334 356
ENSSSCP00000007422 C2H2 ZF 362 384
ENSSSCP00000025296 C2H2 ZF 186 208
ENSSSCP00000025296 C2H2 ZF 214 236
ENSSSCP00000025296 C2H2 ZF 242 264
ENSSSCP00000025296 C2H2 ZF 270 292
ENSSSCP00000025296 C2H2 ZF 298 320
ENSSSCP00000025296 C2H2 ZF 326 348
ENSSSCP00000025296 C2H2 ZF 354 376
ENSSSCP00000028165 C2H2 ZF 193 215
ENSSSCP00000028165 C2H2 ZF 221 243
ENSSSCP00000028165 C2H2 ZF 249 271
ENSSSCP00000028165 C2H2 ZF 277 299
ENSSSCP00000028165 C2H2 ZF 305 327
ENSSSCP00000028165 C2H2 ZF 333 355
ENSSSCP00000028165 C2H2 ZF 361 383

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07886 Aegilops tauschii F775_07886 N 0.000
F775_08955 Aegilops tauschii F775_08955 N 0.000
BRADI5G18430 Brachypodium distachyon BRADI5G18430 N 0.000
MLOC_11130 Hordeum vulgare MLOC_11130 N 0.000
LPERR04G17810 Leersia perrieri LPERR04G17810 N 0.000
MDP0000291622 Malus domestica MDP0000291622 N 0.000
OBART04G21780 Oryza barthii OBART04G21780 N 0.000
OB04G28790 Oryza brachyantha OB04G28790 N 0.000
ORGLA04G0188200 Oryza glaberrima ORGLA04G0188200 N 0.000
OGLUM04G21810 Oryza glumaepatula OGLUM04G21810 N 0.000
BGIOSGA014540 Oryza indica BGIOSGA014540 N 0.000
OLONG_013577 Oryza longistaminata OLONG_013577 N 0.000
OMERI04G18340 Oryza meridionalis OMERI04G18340 N 0.000
ONIVA04G20320 Oryza nivara ONIVA04G20320 N 0.000
OPUNC04G19530 Oryza punctata OPUNC04G19530 N 0.000
ORUFI09G04820 Oryza rufipogon ORUFI09G04820 N 0.000
OS04G0564000 Oryza sativa OS04G0564000 N 0.000
Pavir.J21884 Panicum virgatum Pavir.J21884 N 0.000
Pavir.Ga01021 Panicum virgatum Pavir.Ga01021 N 0.000
Si010837m.g Setaria italica Si010837m.g N 0.000
Si012648m.g Setaria italica Si012648m.g N 0.000
Sb06g025420 Sorghum bicolor Sb06g025420 N 0.000
Traes_2AL_39432DCB1 Triticum aestivum Traes_2AL_39432DCB1 N 0.000
Traes_2AL_BC4CD296F Triticum aestivum Traes_2AL_BC4CD296F N 0.000
Traes_2BL_7BC3DF5C7 Triticum aestivum Traes_2BL_7BC3DF5C7 N 0.000
Traes_2BL_E8D551BE0 Triticum aestivum Traes_2BL_E8D551BE0 N 0.000
Traes_2DL_92641C6CC Triticum aestivum Traes_2DL_92641C6CC N 0.000
TRIUR3_21912 Triticum urartu TRIUR3_21912 N 0.000
TRIUR3_21913 Triticum urartu TRIUR3_21913 N 0.000
GRMZM2G057131 Zea mays GRMZM2G057131 N 0.000
GRMZM2G472589 Zea mays GRMZM2G472589 N 0.000