ZNF454 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000027351 T110561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.798 0.971
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.798 0.971
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.798 0.971
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.798 0.971
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.798 0.971
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.798 0.971
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.798 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000022620 C2H2 ZF 182 204
ENSSSCP00000022620 C2H2 ZF 221 243
ENSSSCP00000022620 C2H2 ZF 249 271
ENSSSCP00000022620 C2H2 ZF 277 299
ENSSSCP00000022620 C2H2 ZF 305 327
ENSSSCP00000022620 C2H2 ZF 333 355
ENSSSCP00000022620 C2H2 ZF 361 383
ENSSSCP00000022620 C2H2 ZF 389 411
ENSSSCP00000022620 C2H2 ZF 417 439
ENSSSCP00000022620 C2H2 ZF 445 467
ENSSSCP00000022620 C2H2 ZF 473 495
ENSSSCP00000022620 C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I 0.798
ZNF454 Bos taurus ENSBTAG00000004262 I 0.798
ZNF454 Callithrix jacchus ENSCJAG00000018857 I 0.797
ZNF454 Canis familiaris ENSCAFG00000031168 I 0.798
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I 0.798
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I 0.791
ZNF454 Equus caballus ENSECAG00000005115 I 0.800
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I 0.793
ZNF454 Felis catus ENSFCAG00000021971 I 0.797
ZNF454 Gorilla gorilla ENSGGOG00000022508 I 0.798
ZNF454 Homo sapiens ENSG00000178187 D 0.798
ENSP00000326249 Macaca fascicularis ENSP00000326249 I 0.789
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I 0.789
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I 0.798
Zfp454 Mus musculus ENSMUSG00000048728 I 0.762
ZNF454 Myotis lucifugus ENSMLUG00000002894 I 0.792
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I 0.798
ZNF454 Ochotona princeps ENSOPRG00000009035 I 0.783
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I 0.806
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I 0.797
ZNF454 Pan troglodytes ENSPTRG00000017611 I 0.798
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I 0.792
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I 0.798
Znf454 Rattus norvegicus ENSRNOG00000022971 I 0.772
ZNF454 Tupaia belangeri ENSTBEG00000000346 I 0.766
ZNF454 Tursiops truncatus ENSTTRG00000012880 I 0.794