ENSSTOG00000005866 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000005866 T110684_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.819 0.967
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.819 0.967
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.819 0.967
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.819 0.967
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.819 0.967
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.819 0.967
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.819 0.967
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.819 0.967
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.816 0.945
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.816 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000005237 C2H2 ZF 154 176
ENSSTOP00000005237 C2H2 ZF 180 202
ENSSTOP00000005237 C2H2 ZF 208 230
ENSSTOP00000005237 C2H2 ZF 236 257

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF248 Bos taurus ENSBTAG00000013592 I
ZNF248 Canis familiaris ENSCAFG00000009629 I
ENSCPOG00000001025 Cavia porcellus ENSCPOG00000001025 I
ENSCSAG00000011166 Chlorocebus sabaeus ENSCSAG00000011166 I
ZNF248 Dasypus novemcinctus ENSDNOG00000006482 I
ZNF248 Erinaceus europaeus ENSEEUG00000003533 I
ZNF248 Felis catus ENSFCAG00000009055 I
ZNF248 Gorilla gorilla ENSGGOG00000016885 I
ZNF248 Homo sapiens ENSG00000198105 D
ENSSTOG00000023212 Ictidomys tridecemlineatus ENSSTOG00000023212 I
ZNF248 Loxodonta africana ENSLAFG00000003918 I
ENSP00000379208 Macaca fascicularis ENSP00000379208 I
ZNF248 Macaca mulatta ENSMMUG00000010741 I
ENSMICG00000005329 Microcebus murinus ENSMICG00000005329 I
ENSMPUG00000006471 Mustela putorius furo ENSMPUG00000006471 I
Zfp248 Mus musculus ENSMUSG00000030145 I
ZNF248 Myotis lucifugus ENSMLUG00000003873 I
ENSNLEG00000008682 Nomascus leucogenys ENSNLEG00000008682 I
ZNF248 Ochotona princeps ENSOPRG00000016243 I
ZNF248 Oryctolagus cuniculus ENSOCUG00000009791 I
ZNF248 Otolemur garnettii ENSOGAG00000029260 I
ENSOARG00000003883 Ovis aries ENSOARG00000003883 I
ZNF248 Pan troglodytes ENSPTRG00000002429 I
ENSPANG00000022741 Papio anubis ENSPANG00000022741 I
ENSPPYG00000002202 Pongo abelii ENSPPYG00000002202 I
ZNF248 Procavia capensis ENSPCAG00000016125 I
ZNF248 Pteropus vampyrus ENSPVAG00000012375 I
Zfp248 Rattus norvegicus ENSRNOG00000037251 I
ZNF248 Sorex araneus ENSSARG00000001057 I
ENSTSYG00000006442 Tarsius syrichta ENSTSYG00000006442 I
ZNF248 Tupaia belangeri ENSTBEG00000002389 I
ZNF248 Tursiops truncatus ENSTTRG00000003732 I