ZBTB18 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000008247 T111424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000008494 C2H2 ZF 370 392
ENSTGUP00000008494 C2H2 ZF 411 432
ENSTGUP00000008494 C2H2 ZF 438 460
ENSTGUP00000008494 C2H2 ZF 466 489

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I
HIF1A Anolis carolinensis ENSACAG00000016205 I
Afo_R010338 Aptenodytes forsteri Afo_R010338 I
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I
e_gw.35.42.1 Branchiostoma floridae e_gw.35.42.1 I
e_gw.35.150.1 Branchiostoma floridae e_gw.35.150.1 I
Brh_R012268 Buceros rhinoceros Brh_R012268 I
Aan_R001655 Calypte anna Aan_R001655 I
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I
HIF1A Gallus gallus ENSGALG00000011870 I
Gfo_R006824 Geospiza fortis Gfo_R006824 I
HIF1A Homo sapiens ENSG00000100644 D
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I
HIF1A Meleagris gallopavo ENSMGAG00000013552 I
HIF1A Monodelphis domestica ENSMODG00000008760 I
Ogr06281 Ophisaurus gracilis Ogr06281 I
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I
HIF1A Taeniopygia guttata ENSTGUG00000012978 I
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I
Tal_R011146 Tyto alba Tal_R011146 I
AAI26006 Xenopus laevis AAI26006 I
AAO72733 Xenopus laevis AAO72733 I
ABF71072 Xenopus laevis ABF71072 I
hif1a Xenopus tropicalis XB-GENE-946622 I